Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0314 ATGGGAAGACACTCTTGCTGTTACAAGCAGAAACTTAGGAAAGGCCTCTGGTCTCCCGACGAAGATGAGAAGCTTCTCAATTACATCACCAAGCACGGCCATGGCTGTTGGAGCTCCGTCCCCAAACTCGCCGACTTGCAGAGGTGTGGCAAAAGCTGCAGGTTGAGGTGGATAAATTACCTGAGGCCTGATTTGAAAAGAGGAGCATTCTCGCAGCAGGAAGAGGATTTGATAATTGAACTCCATGCAGTCCTGGGCAACAGGTGGTCACAGATTGCAGCTCAGCTGCCAGGAAGAACTGACAATGAGATCAAGAATCTATGGAATTCCTGCCTCAAGAAGAAGCTCAGGCAAAGAGGCATTGACCCCAACACCCACAAGCCACTCTCTGAGGTTGAGAACGACAAGGACAAGCCCCCCTCGGCCGACAAAAGCCATCACAGAGAATTAAGTATAACAGAGCCTTCAAAGCCAAAGCCAAACGCAGTAATGCCTTCGGAGCGATACCCGGTTGAAGTTTCTTCCGGTTCCAACAAGATCGGCAATAGCTGCACTATTAGCAGCAATTTGACCCGCAACCGACCCACCCAGGATTTGTTCCTCGATAGCTCCATCACCAGTTGTGGTCCTTCTGATATGATGGGTTACTTCTCTTTCCAGCAGTTGAACTATCCACCACATGTTGGCCTCCCCGCAAATCCCAACGGCTCTCTCTGCTTCATGTCGGGTTCCAGTTCCTCTCAGGTGATGTCAGAGCTCAATTCTAGTGTGCTTAACTCTGTCCCAAGCTCGATTTTCCCAACAACACATATAAGTACCACTGTTAGTCTCCAGTCTGATAATCCATCCATATCCTCTGGCGATATTGATGGAGTCCAGAACTGGGAAGCCAGTATCCTCGCTAACAACGGCACCAAAAGCAATGGGCGCAGTGGGAGTATCCAATTGCAAAGCAGCAGCAACTTCCTCGAGAACAACAGTTTAGCATGGGCATTGGCAGACTCTGTGAAGGCTAATAAAGATGCTCAAGTACCCCTACAAGCAGAACAAGAAGAAATTAAATGGTCTGAGTATCTGAACACCCCGTTTTTTCTGGGGAACACAGCACAGAATCAAAACTGTCAATCTATTTACAGTGAGGTTAAACCAGAGACAGGCTTCATAACAGATGAATCAGGTAACAGTTGGCACCACCCCCAGCATCCGTCCGTTTTTCAAGCTTCAGATATCTACACCAAGGATCTGCAAAGATTCTCAGTGGCTTTTGGACAAACCCTGTAG 1281 0.4817 MGRHSCCYKQKLRKGLWSPDEDEKLLNYITKHGHGCWSSVPKLADLQRCGKSCRLRWINYLRPDLKRGAFSQQEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNTHKPLSEVENDKDKPPSADKSHHRELSITEPSKPKPNAVMPSERYPVEVSSGSNKIGNSCTISSNLTRNRPTQDLFLDSSITSCGPSDMMGYFSFQQLNYPPHVGLPANPNGSLCFMSGSSSSQVMSELNSSVLNSVPSSIFPTTHISTTVSLQSDNPSISSGDIDGVQNWEASILANNGTKSNGRSGSIQLQSSSNFLENNSLAWALADSVKANKDAQVPLQAEQEEIKWSEYLNTPFFLGNTAQNQNCQSIYSEVKPETGFITDESGNSWHHPQHPSVFQASDIYTKDLQRFSVAFGQTL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0314 426 Gene3D - 68 146 - -
Acco02g0314 426 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco02g0314 426 FunFam Myb transcription factor 11 67 - -
Acco02g0314 426 Gene3D - 11 67 - -
Acco02g0314 426 PANTHER MYB DOMAIN PROTEIN 55 1 321 - -
Acco02g0314 426 MobiDBLite consensus disorder prediction 119 154 - -
Acco02g0314 426 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco02g0314 426 FunFam MYB transcription factor 68 140 - -
Acco02g0314 426 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Acco02g0314 426 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco02g0314 426 CDD SANT 17 61 IPR001005 -
Acco02g0314 426 SMART sant 66 114 IPR001005 -
Acco02g0314 426 SMART sant 13 63 IPR001005 -
Acco02g0314 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco02g0314 426 MobiDBLite consensus disorder prediction 119 165 - -
Acco02g0314 426 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Acco02g0314 426 CDD SANT 69 109 IPR001005 -
Acco02g0314 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0314 Acco-ChrAcco02 2316951 2318405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0314 1 426 MYB Transcription Factor Family AT1G09540 47.489 4.83e-118 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco02g0314 Myb_DNA-binding 1.1e-13 CL0123