Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco02g0306 | ATGGGATGGAAAGGAAAGGGTCTGGGGAAGAATGAGCAAGGAATTACTGAGCCAATAAAATCTGGCATTAGAGATCCCAGATTGGGGGTGGGTAAACAAGAAGAAGATGATTTTTTCACTGCTGAAGAAAATATCCAGCGAAAGAAACTTGATGTAGAGTTGGAGGACACGGAGGAAAATATGAGGAAGCGAGAGGTTTTGGCGGAACGTGAGCAAAAAATTCAAACTGAAGTGAATGAGATACGAAAGGTGTTCTTTTGTGAACTCTGCAACAAGCAGTACAAATTGGCCATGGAATTTGAAGCACACTTGAGCTCATATGATCACAATCACAGAAAGCGTTTCAAAGAAATGAAGGACATGCATGGTAGTAGCAGCCGAGATGATAGGCAAAGAAGGGAACAGCAGCGTCGAGAGAGGGAAATGGCTAAGTTTGCCCAAATGGCTGACGCTCAAAAGCAGCAACAGCTGCAACAACAACAAGAAGAATCTGGATCTGCTTTGGTTTCCTCTGAATCTAGAACTGCTACTGCACTTGCAGATCAGGATCAGCGGAAGACTTTGAAGTTTGGGTTTTCTTCCAAGGGAAGTGCTTCCAAGAACTCATTCAGTGGTGCTGCAAAGAAGCAAAAAGTAGCCATATCATCTGTATTCAGTGCCGATGCTGATGAAGAAGATTAA | 681 | 0.4332 | MGWKGKGLGKNEQGITEPIKSGIRDPRLGVGKQEEDDFFTAEENIQRKKLDVELEDTEENMRKREVLAEREQKIQTEVNEIRKVFFCELCNKQYKLAMEFEAHLSSYDHNHRKRFKEMKDMHGSSSRDDRQRREQQRREREMAKFAQMADAQKQQQLQQQQEESGSALVSSESRTATALADQDQRKTLKFGFSSKGSASKNSFSGAAKKQKVAISSVFSADADEED | 226 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco02g0306 | 226 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Acco02g0306 | 226 | MobiDBLite | consensus disorder prediction | 149 | 209 | - | - | |
| Acco02g0306 | 226 | SMART | G-patch_5 | 1 | 33 | IPR000467 | GO:0003676 | |
| Acco02g0306 | 226 | SUPERFAMILY | beta-beta-alpha zinc fingers | 66 | 120 | IPR036236 | - | |
| Acco02g0306 | 226 | Pfam | Zinc-finger double-stranded RNA-binding | 85 | 112 | IPR022755 | - | |
| Acco02g0306 | 226 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 87 | 109 | IPR013087 | - | |
| Acco02g0306 | 226 | MobiDBLite | consensus disorder prediction | 118 | 146 | - | - | |
| Acco02g0306 | 226 | MobiDBLite | consensus disorder prediction | 118 | 226 | - | - | |
| Acco02g0306 | 226 | Pfam | G-patch domain | 1 | 31 | IPR000467 | GO:0003676 | |
| Acco02g0306 | 226 | PANTHER | FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED | 1 | 225 | - | - | |
| Acco02g0306 | 226 | Coils | Coil | 40 | 60 | - | - | |
| Acco02g0306 | 226 | ProSiteProfiles | G-patch domain profile. | 1 | 35 | IPR000467 | GO:0003676 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco02g0306 | 1 | 225 | C2H2 Transcription Factor Family | AT5G26610 | 70.175 | 3.43e-97 | 283 |