Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0294 ATGGGCGGAGGTGGAGCGACGCCGAACGTGGAGGCACAGTACTCGTCGGCGAAGATCTCGGTTTGGTGGGACATCGAGAACTGCCATGTCCCCAAGGGCTGCGATCCGCACGCAATCGCCCAGAACATCAGCTCAGCGCTGGTTCAGATGAATTATTGTGGGCCCGTTTCCATCTCCGCCTACGGCGATACTACTCGCATCACGGCTTCTGTACAGCACGCTCTCTCCAGTACTGGAATCTCCCTCAACCATGTCCCAGCCGGCGTTAAAGACGCCAGTGACAAAAAGATTCTCGTCGATATGCTGTTTTGGGCTGTGGATAATCCTGCTCCTGCTAATTATCTATTAATATCCGGTGATCGAGACTTCTCTAACGCACTTCATCAATTGCGGATGAGGAGATATAATATCCTTCTTGCACAGCCTCAGAAAGCATCTGCACCCTTAGTTGCAGCTGCCAAGAGTGTGTGGCTTTGGACTACTCTCTTAGCTGGAGGAGCTCCTCTAACAAATGGTGAATCACAACAATTTGGTAATAATAGCAACCTATCGAGTTCTGACACTTTACAAATCCCAGGCTTTAGTTCTGCTCAGACAAAGCAACAAAGGGATTCCTTTGCTGAAGTTCACGTAGCAAATCATAACCATAATCATAAATTTTCAAATGCTGGAAGGGGATTAGATTCTAGATACCAGGGTAAAACAACTTGGAGAAGCCCTAGTCAACCAAATGGACCCAAACCATTGAACCAACCGATTGGACTTCAAGAAAATCATAGCAGTATAAACTCTTATCGAGCTGGCAACCCAAATGTTCCCCCAAATGGATCTGCTCCAAATTTTGTGCATGGCAGTCCTGGTCAATTATGGAGCAATAGCAGCAATCTACCAGGCAATAGCCAAAGACCCAACAATTATCCAATGCAACCTGCTTTTGCACAAAACAACCAATATCCACCAAACACACATTCTTTTGCAACTCCAGTAGTGCCTCCTAGAACTGGTGGACTCAACTTCACCTCAGGACTACTTACAAATGTGCCAGATATAGGTAATCTGAACATATCCGCATTGCCAAAACAGAATCCTATCAATAATGCTCTACATCCTAAAAGGTCAGTTGATGAACAAAATGGACATACAGTACAGAACAACCAACCATTATACCATGCCCACTCGTTTGGTCCAGATCATCTACCTCCACCTATGGCAGCAATGGGTAGTAATAACCCTCCTGGTAATAGCATGTGGGGATCTTCAGGATGTCCTAAACCTTCTGAATATGTACAAGGGCTTATTGGGGTTGTTTTGCTTGCCTTGAACACGTTAAAAAATGAAAAAATAATGCCAACTGAGGCAAATATAACTGATTGCATCCGATATGGAGATCCTAAACACCGCAGCACTGATGTTAAGAAGGCTTTGGAGAGTGCTATTGAACAACAGATGGTGGTGAAACAGAATTTAGGTGCTTTGCAGTTGTATATTGGTAAAAATGATAAACTTTGGAAGTGCGTAAATCCTATAGGTGGTAATCCCAATCAACACTCGAAAGAAACATGGGATGAAATCCAAAAATTTTTAACCACTCCTTCTGGAAGACTTGCAATAATGAATACTCAATGCAAATATGAAGCAGGTACTGTGATAAAGAATATGTGCTTAAAAGATGTTGCTTTGGGAGATGTTCTTCAGATTTTGAACATGGTGATCGCTAATAAAAAATGGATCATGCATCGTCAGCCAGGATGGCAACCACTTACCATTACTACCTCAGGCGAATTCTGA 1788 0.4357 MGGGGATPNVEAQYSSAKISVWWDIENCHVPKGCDPHAIAQNISSALVQMNYCGPVSISAYGDTTRITASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTTLLAGGAPLTNGESQQFGNNSNLSSSDTLQIPGFSSAQTKQQRDSFAEVHVANHNHNHKFSNAGRGLDSRYQGKTTWRSPSQPNGPKPLNQPIGLQENHSSINSYRAGNPNVPPNGSAPNFVHGSPGQLWSNSSNLPGNSQRPNNYPMQPAFAQNNQYPPNTHSFATPVVPPRTGGLNFTSGLLTNVPDIGNLNISALPKQNPINNALHPKRSVDEQNGHTVQNNQPLYHAHSFGPDHLPPPMAAMGSNNPPGNSMWGSSGCPKPSEYVQGLIGVVLLALNTLKNEKIMPTEANITDCIRYGDPKHRSTDVKKALESAIEQQMVVKQNLGALQLYIGKNDKLWKCVNPIGGNPNQHSKETWDEIQKFLTTPSGRLAIMNTQCKYEAGTVIKNMCLKDVALGDVLQILNMVIANKKWIMHRQPGWQPLTITTSGEF 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0294 595 MobiDBLite consensus disorder prediction 173 206 - -
Acco02g0294 595 PANTHER LIMKAIN B LKAP 15 486 IPR024768 GO:0005777|GO:0010468
Acco02g0294 595 Gene3D - 10 161 - -
Acco02g0294 595 CDD PIN_limkain_b1_N_like 18 142 - -
Acco02g0294 595 MobiDBLite consensus disorder prediction 173 303 - -
Acco02g0294 595 MobiDBLite consensus disorder prediction 216 303 - -
Acco02g0294 595 Pfam OST-HTH Associated domain 537 589 IPR025677 -
Acco02g0294 595 Pfam NYN domain 18 154 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0294 Acco-ChrAcco02 2186557 2189065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0294 11 187 C2H2 Transcription Factor Family AT5G61190 72.881 2.94e-81 274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0294 02 2186557 2189065 Acco02g0294 02 2186557 2189065 ECH