Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0290 ATGGGGACTGAAAATCCTGGACGTTCAAGTTTTCCTGCTAGGCCTGCCACAACACCTTTTGCTCCTCCACAGACTGTGACACCGTTTTCATCAACTGGTCCTGTGGTTGGATCTGAGCCTCCTTTCCCCCGTCCTCCTCCTCCTCCTGCTCCCCAGCCTTCAGTGCCATTGTCATCATCCGGACCTACTGTCACACCAGGGGCATCCAATTTTAGGCCTATCCCTCCTAGCAGGTTTAATGATCCATCTGTGCCTTCGCCTCCAACGTACAATGTCCCACCTGCCGGTGGACCTTTCCAGCGTTTTCCAACTCCACAGTTTACCCCAACAGCCCAAGCTCCTCCACGTGTTCCACCCATAGGACAACCATCAATCCCGCCTTCTGGGAATCAAGCACCGCCTTTTCCTGCAGCCCTTCAACCACAGACACCAATTGTTCCTATGGGTTCTCCCCCACAAAGTGCTCCCCCTGCACCTTTGAAGTCTAATGTTCATCCTTTGTCAGATTCAACATTTCCAGGGTCTAGGCCTAATTTTCAGCCATCTTTTCCTGGATATGTCCGCAAGCAGACTGGTACTGAAATGCAAGGTGCACCGGTGCCTCCATCTTTTCCCACCAATCAAGGTATTTATGCGCCTGCCCCACCTGCTCTATCTCATCAAGGGAGTTATGTTCCACCGCCTCCAGTGGCTGCTCCATTGGGCATGCAGCAGATGCAACAGCTAGGATATGGACCTTCTGTTGGTGCCATTCAGGGCCTGGCAGAAGACTTCAGTTCACTCTCTATTCAAACTCGTCCTGGTTCAATAGAAAAAGCAGTTGATACTAAAGAACTTCCAAGGCCACTGGATGGTGATGTGGAGCCAACATCTCTGGCTGACCTTTTCCCCATGAACTGCAACCCCAGATATCTACGGTTGACAACCAGTGCAATTCCCAGCTCTCAGTCCTTAGCTTCAAGATGGCATCTACCTCTTGGAGCAGTTGTTTGCCCACTTGCAGAACCTCCTGATGGGGAAGAGGTGCCTATAATCAATTTTGCTCCAACTAGTGTCATAAGGTGTAGGAGATGTCGCACTTATGTGAATCCATATGTGACTTTCACAGATGCTGGAAGAAAATTTCGGTGCAATGTTTGCAATTTGCTGAATGACGTGCCTAGTGAATATTTTGCTCAATTAGATGCCACTGGTAGAAGAGTTGATTTGGATCAAAGACCTGAGCTTACAAAGGGTACTGTGGAATTTGTTGCCCCTGCTGAATATATGGTGCGACCTCCTATGCCCCCAGTGTATTTCTTCCTTATTGATGTTTCCATATCTGCGGTTAGAAGTGGAATGATTGAGGTTGTGGCCCAAACAATCAAAACATGTCTAGATGAGTTGCTTGGCTCTCCACGAACCCAAATAGGTTTTGCGACTTTTGACAGCACAATTCATTTTTATAATATGAAGTCTTCCTTGACTCAGCCACAGATGTTGGTAGTCTCAGATTTGGATGACATATTTGTTCCACTTCCGGATGATCTCCTTGTTAATTTATCTGAATCCAGAAGTGTGGTGGAGACCTTCCTTGATAGTTTACCATCCATGTTCCAGAACAATGCAAACATTGAATCAGCCTTTGGTCCAGCTCTTAAGGCTGCGTTCATGGTTATGAGTCAACTTGGAGGGAAACTATTAATTTTCCAAAACACACTGCCATCTCTTGGAGTTGGGCGCTTAAGATTACGTGGAGATGATGCTCATGTTTATGGGACTGACAAAGAACACATGTTAAGGTTGCCAGAAGATCCATTTTACAAGCAGATGGCTGCTGAGTTTTCTAAATACCAGATCTGTGCTAATTTGTATGCATTTAGTGACAAGTACACTGACATTGCATCCTTAGGAACTTTGGCAAAGTATACTGCCGGTCAAATCTATTACTATCCAGCTTTCCAATCAACTATTCATGGGGAGAAGTTGAGGCATGAGTTAAGGAGAGACCTAACCAGAGAAACTGCATGGGAAGCTGTACTACGCATTAGATGTGGAAAAGGTGTCCGCTTCACAACTTTTCACGGGAACTTCATGCTAAGATCTACCGATTTGTTAGCACTTCCAGCTGTTGATTGTGATAAAGCTTTTGCTATGCAGTTATCTCTTGAAGAGACATTGCTGACAACTCAGACTATGTATTTCCAAGCTGCATTGCTATATACTGCATCTTGTGGGGAAAGACGGATCAGAATACACACTGCTGCAGCTCCAGTAGTTACAGACTTGGGAGAGATGTATCGCCTGGCTGATACTGGTGCCATAGTTTCTGTACTTGGTCGGCTAGTAATTGAGAAAACATTGTCTAGCAAACTGGAAGATGCAAGGAGTGCTGTACAGTTAAGAATTGTCAAGGCCCTCAGAGAATATCGAAATCTATATGCTGTGCAACATCGCTTGGCTAACAGGATGATATATCCTGAGTCTCTAAAATTCCTACCATTGTATGGCTTAGCACTTTGTAAATCAATACCTCTCCGTGGAGGGTTTGCTGATGCTCTGCTGGATGAACGGTGTGCAGCAGGATACACAATGATGGCTCTACCGATAAAAAGGCTGTTGAAATTTCTATATCCAAGCTTAGTTCGACTCGATGAATATCTATTGAAGTCTGATGAATTAAAAAGCATTGAGAAAAGGTTACCATTGACTGGTGAGAGCTTGGATTCTAGAGGCCTTTATGTATATGATGATGGCTTCCGGTTCCTTATATGGTTTGGTAGAGTGCTTTTACCTGATATAGCTATGAATTTGCTTGGGGCAGACTTCGCTGCAGAATTATCAAAGGTTACTCTTAAGGAGCATGATAATGAGATGTCAAGGAAGTTAATCAGGATACTTGAGAAACTGAGAAATACTGATCATTCGTATTATCAGTTGTGCTATCTTGTGAGGCAAGGCGAACAGCCCAGAGAAGGATTCCTTATCCTTGCAAGTCTTGTTGAGGATCAGATGGGTGGTGCAGCAATAATAATTGAAAGAGCAGGGTCTTTGTCAGCGTCTGTCTGTCTGATCAGTGAAGTCGGAGCCATTTTTTCCATGGATAGGGACAAAGATTGA 3099 0.4489 MGTENPGRSSFPARPATTPFAPPQTVTPFSSTGPVVGSEPPFPRPPPPPAPQPSVPLSSSGPTVTPGASNFRPIPPSRFNDPSVPSPPTYNVPPAGGPFQRFPTPQFTPTAQAPPRVPPIGQPSIPPSGNQAPPFPAALQPQTPIVPMGSPPQSAPPAPLKSNVHPLSDSTFPGSRPNFQPSFPGYVRKQTGTEMQGAPVPPSFPTNQGIYAPAPPALSHQGSYVPPPPVAAPLGMQQMQQLGYGPSVGAIQGLAEDFSSLSIQTRPGSIEKAVDTKELPRPLDGDVEPTSLADLFPMNCNPRYLRLTTSAIPSSQSLASRWHLPLGAVVCPLAEPPDGEEVPIINFAPTSVIRCRRCRTYVNPYVTFTDAGRKFRCNVCNLLNDVPSEYFAQLDATGRRVDLDQRPELTKGTVEFVAPAEYMVRPPMPPVYFFLIDVSISAVRSGMIEVVAQTIKTCLDELLGSPRTQIGFATFDSTIHFYNMKSSLTQPQMLVVSDLDDIFVPLPDDLLVNLSESRSVVETFLDSLPSMFQNNANIESAFGPALKAAFMVMSQLGGKLLIFQNTLPSLGVGRLRLRGDDAHVYGTDKEHMLRLPEDPFYKQMAAEFSKYQICANLYAFSDKYTDIASLGTLAKYTAGQIYYYPAFQSTIHGEKLRHELRRDLTRETAWEAVLRIRCGKGVRFTTFHGNFMLRSTDLLALPAVDCDKAFAMQLSLEETLLTTQTMYFQAALLYTASCGERRIRIHTAAAPVVTDLGEMYRLADTGAIVSVLGRLVIEKTLSSKLEDARSAVQLRIVKALREYRNLYAVQHRLANRMIYPESLKFLPLYGLALCKSIPLRGGFADALLDERCAAGYTMMALPIKRLLKFLYPSLVRLDEYLLKSDELKSIEKRLPLTGESLDSRGLYVYDDGFRFLIWFGRVLLPDIAMNLLGADFAAELSKVTLKEHDNEMSRKLIRILEKLRNTDHSYYQLCYLVRQGEQPREGFLILASLVEDQMGGAAIIIERAGSLSASVCLISEVGAIFSMDRDKD 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0290 1032 SUPERFAMILY beta-sandwich domain of Sec23/24 195 762 - -
Acco02g0290 1032 Gene3D Sec23/Sec24 helical domain 753 998 - -
Acco02g0290 1032 Gene3D - 300 752 - -
Acco02g0290 1032 Gene3D - 299 411 - -
Acco02g0290 1032 SUPERFAMILY vWA-like 427 666 IPR036465 -
Acco02g0290 1032 Pfam Sec23/Sec24 helical domain 764 867 IPR006900 GO:0006886|GO:0006888|GO:0030127
Acco02g0290 1032 CDD Sec24-like 427 668 IPR041742 GO:0006886|GO:0006888|GO:0030127
Acco02g0290 1032 MobiDBLite consensus disorder prediction 78 100 - -
Acco02g0290 1032 Gene3D Severin 872 996 IPR029006 -
Acco02g0290 1032 Pfam Sec23/Sec24 trunk domain 427 663 IPR006896 GO:0006886|GO:0006888|GO:0030127
Acco02g0290 1032 Pfam Sec23/Sec24 beta-sandwich domain 669 752 IPR012990 -
Acco02g0290 1032 MobiDBLite consensus disorder prediction 38 56 - -
Acco02g0290 1032 MobiDBLite consensus disorder prediction 1 161 - -
Acco02g0290 1032 SUPERFAMILY Helical domain of Sec23/24 764 871 IPR036175 GO:0006886|GO:0006888|GO:0030127
Acco02g0290 1032 FunFam protein transport protein Sec24D isoform X1 429 666 - -
Acco02g0290 1032 Pfam Sec23/Sec24 zinc finger 353 390 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Acco02g0290 1032 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 880 1000 IPR036180 -
Acco02g0290 1032 PANTHER SEC24-RELATED PROTEIN 92 1001 - -
Acco02g0290 1032 SUPERFAMILY Zn-finger domain of Sec23/24 344 426 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Acco02g0290 1032 Gene3D von Willebrand factor, type A domain 429 666 IPR036465 -
Acco02g0290 1032 MobiDBLite consensus disorder prediction 108 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0290 Acco-ChrAcco02 2128163 2139476 Dispersed