Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0289 ATGCCACTGGGGAAGTATTACTGCGATTATTGCGACAAGCACATACAGGACACGCCTACAGCTCGTAAACGACATCTTCAAGGTATCCAGCACCTCCGTTCTAAAGCACTCTGGTACGATTCCTTCAAATTTCAAGATCCTAGTCAGGTTTATCCAGATGGATTTGTCAAAGGGGTTTGCAATCGCTTCGTCAAAACGGGTTTTTGCCAGTACGGTGATTCTTGCAAGTATGCTCATCCAAGAAACTTGACCAATGCCAACCTTCAAGGGGGAATGAGTGATAATATGCAGCCAGCAGCATCAACAATGGCGACTAATTTGGTTGGCGGAGGCTCTACACCAGGAAATGTGGTGCAAGACAGTATGGGAATGGCATGGGACAATTTACCTCCATCTTTGAAGCCTCCTCCCGAAGGTGGATATCCAGCCCTTCCCTTTGTGGACTGGGGATAG 453 0.4746 MPLGKYYCDYCDKHIQDTPTARKRHLQGIQHLRSKALWYDSFKFQDPSQVYPDGFVKGVCNRFVKTGFCQYGDSCKYAHPRNLTNANLQGGMSDNMQPAASTMATNLVGGGSTPGNVVQDSMGMAWDNLPPSLKPPPEGGYPALPFVDWG 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0289 150 SMART c3hfinal6 54 81 IPR000571 GO:0046872
Acco02g0289 150 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 59 81 IPR000571 GO:0046872
Acco02g0289 150 Gene3D - 54 110 - -
Acco02g0289 150 SUPERFAMILY beta-beta-alpha zinc fingers 4 44 IPR036236 -
Acco02g0289 150 PANTHER NUCLEASE-RELATED 1 150 - -
Acco02g0289 150 ProSiteProfiles Zinc finger C3H1-type profile. 54 82 IPR000571 GO:0046872
Acco02g0289 150 Pfam U1 zinc finger 5 36 IPR013085 GO:0008270
Acco02g0289 150 Gene3D Classic Zinc Finger 3 53 - -
Acco02g0289 150 FunFam U1 zinc finger family protein 3 57 - -
Acco02g0289 150 SUPERFAMILY CCCH zinc finger 58 82 IPR036855 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0289 51 100 C2H2 Transcription Factor Family AT5G18550 40.000 2.26e-06 44.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Acco02g0289 zf-U1 8.9e-12 CL0361