Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0282 ATGGCGAGCGGGCTAATTCCATTTCTGGCGATGGCTTTTGTGCAGTTGGGGTACGTAGGCATGAATATCATTTCAAAGCTTGCAATGCAATCTGGCATGAACCCTATCGTCCTCGCCGCTTATCGCCAAATCTTCGCCACACTTGCCATAGCTCCCTTTGCTTTCTGCTTCGAACGCAAAACGGTCCCCAAGTTGACCAAGCCTATTATGTTCCAGATATTGCTTTCTTCCTTAACTGGAGTAACAGGAAACCAAGTATTGTTCTTCCTGGGGCTGAAATACTCAACCACTACCATTGCATGCGCAATGACAAATGTGCTCCCAGCTTTTACCTTTATCCTTGCGCTCATCTTCAGACAAGAGTACCTGAGAATAAGGGTGTGGAGTGGGCAAGCAAAGATAGTAGGGACCGTATTGTGTGTAGGTGGAGCCTTGGTATTGTCATTCTACCATGGAAATGTCATTGAAATAGGTGAATCAATTATTCACTGGGGATATGCAGAGAGAATGCAAGAAACAAGTTCCTCTGCCAAAGCCAACTCGTTTCTTGGCCCTTTCTTCTTAATTGTCAGTGCTCTTGTGTGGGCAGTGTGGTTCGTCGTCCAGGCGGACATGGTAAAACATTTTCCAGCTCCGTATACGAGCACAGCCTACATGTGCCTCTTGGCAAGCTTCCAGTGTGTGGTCATTGCTCTGTGTTTTGATCACAGCGCCTCAGCTTGGTCCCTCAAAAATCCCATCCGAGTCATTTCTTCTCTTTATTCGGGAGTTCTTTGCACAGGAGTGGCGTATGCGCTTATGTCGTGGACTATTGAGAGGAAAGGTCCTCTTTATGTGTCTGTGTTCACCCCCTTGCAGCTCGTCATCACTGCCTTTATCAGCTGGGCTCTGCTTCGCGAGGAAATATACGTCGGAACTGCTGTAGGGTCGCTGCTCATAGTTTTGGGACTCTACTCTGTTTTGTGGGGGAAGAACAAGGAGATTGCCAAGAAAGACGAGAATGAAGAAGATATAGAAGAAGCGGCAGAGAAGAAGGCAAGAGAGGTGAATAATAGCGAATTGGGATTGCATTCCTTGATGGTGTCTTCCAACGCGAATGATGAGTTTGCTGCTAGAGCTCCTTCTCGCCTTCACAGGCTCTGCTCTCATTGTATTCGGATCTGCACTCAAATCAGCGATCGTCTTATCTCTCTCCATCTGAAAGAAGAGATGGGGCTGTCTTTCGGCAAGCTATTTAGCCGGCTCTTTGCCAAGAAAGAGATGCGTATTCTGATGGTTGGTCTAGATGCTGCTGGTAAGACTACCATCCTATACAAGCTCAAGCTGGGAGAGATCGTGACCACCATTCCTACCATTGGGTTTAATGTAGAGACTGTGGAATACAAAAATATTAGCTTCACCGTCTGGGATGTGGGTGGCCAAGACAAGATTCGTCCTTTATGGAGACACTATTTCCAAAATACACAAGGGCTTATCTTTGTTGTTGATAGCAATGATCGTGATCGTGTTGTTGAGGCGAGAGATGAACTTCACCGGATGTTGAATGAGGACGAGTTGAGAGATGCAGTACTTCTTGTATTTGCCAACAAGCAAGATCTACCAAATGCTATGAATGCTGCCGAAATCACAGACAAGCTTGGCCTTCATTCTCTCCGTCAGCGCCACTGGTACATCCAAAGCACGTGTGCTACTTCTGGTGAAGGACTCTATGAGGGACTGGACTGGCTCTCAAGCAATATAGCCAACAAGGCTTAA 1755 0.4672 MASGLIPFLAMAFVQLGYVGMNIISKLAMQSGMNPIVLAAYRQIFATLAIAPFAFCFERKTVPKLTKPIMFQILLSSLTGVTGNQVLFFLGLKYSTTTIACAMTNVLPAFTFILALIFRQEYLRIRVWSGQAKIVGTVLCVGGALVLSFYHGNVIEIGESIIHWGYAERMQETSSSAKANSFLGPFFLIVSALVWAVWFVVQADMVKHFPAPYTSTAYMCLLASFQCVVIALCFDHSASAWSLKNPIRVISSLYSGVLCTGVAYALMSWTIERKGPLYVSVFTPLQLVITAFISWALLREEIYVGTAVGSLLIVLGLYSVLWGKNKEIAKKDENEEDIEEAAEKKAREVNNSELGLHSLMVSSNANDEFAARAPSRLHRLCSHCIRICTQISDRLISLHLKEEMGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSSNIANKA 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0282 584 ProSiteProfiles small GTPase Arf family profile. 414 580 - -
Acco02g0282 584 SMART arf_sub_2 404 584 - -
Acco02g0282 584 PRINTS GTP-binding SAR1 protein signature 422 445 IPR006689 GO:0003924|GO:0005525
Acco02g0282 584 PRINTS GTP-binding SAR1 protein signature 450 474 IPR006689 GO:0003924|GO:0005525
Acco02g0282 584 PRINTS GTP-binding SAR1 protein signature 477 502 IPR006689 GO:0003924|GO:0005525
Acco02g0282 584 PRINTS GTP-binding SAR1 protein signature 522 543 IPR006689 GO:0003924|GO:0005525
Acco02g0282 584 CDD Arf1_5_like 421 579 IPR045872 GO:0003924
Acco02g0282 584 Gene3D - 409 584 IPR027417 -
Acco02g0282 584 FunFam ADP-ribosylation factor 1 404 584 - -
Acco02g0282 584 SMART rab_sub_5 421 583 - -
Acco02g0282 584 NCBIfam small GTP-binding protein domain 419 553 IPR005225 GO:0005525
Acco02g0282 584 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 141 - -
Acco02g0282 584 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020
Acco02g0282 584 Pfam EamA-like transporter family 18 148 IPR000620 GO:0016020
Acco02g0282 584 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 417 582 IPR027417 -
Acco02g0282 584 PANTHER WAT1-RELATED PROTEIN 7 333 IPR030184 GO:0016020|GO:0022857
Acco02g0282 584 Pfam ADP-ribosylation factor family 410 580 IPR006689 GO:0003924|GO:0005525
Acco02g0282 584 SMART sar_sub_1 404 580 IPR006689 GO:0003924|GO:0005525
Acco02g0282 584 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 325 - -
Acco02g0282 584 Coils Coil 324 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0282 Acco-ChrAcco02 2085044 2091088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0282 3 340 Nodulin-like Gene Family AT1G09380 56.215 1.89e-140 410