Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0273 ATGGAGTCTTTGCAGCACAACGTAGATTCTATTCATTCCGATAGGTTGCCACCATCCACTCTCAAAAGGAGCACCAATTTTGCGGCCGATCCTAATGATCACAATTCTTTCCACCCCGTTCGATGGAGATCCGACACGGAGCGTCGGATCTACTCCTCTAAGCTCATCGAAGCTCTGCGCCACGTCCTCTGTCGCAGTCCTTCTCTCCCACCCAAACGTGGCGGCGGTCGTGAAATTCGTGAGACGGCTGATAGAGTTCTAGCCGCGACGGCCAAGGGCAGAACTCGATGGAGTCGAGCGATTCTGGCTTCTCCTCTCAGCCGTTGGAGATTACAGAGGCAACACAAGAAGGTGAAGAAGATGACGAGTGGATTGAAGAAACCGGATATCAGGAAGGAGAGGAGGTCACCGGCTCTGCAGAAGAAAGCGCGCGTTCTCGGCCGATTAGTTCCTGGTTGCCGTAAGGTTTCCTTTCCGAATCTTCTGGAAGAAACCACTGACTATATATCGGCCTTGGAGATGCAAATTCGAGCCATGACGACACTCACCGAATTACTCGCTGGTGGTGCCGCGCCGGCCGATCGACTCGAGGGGCCTCGACCATAA 606 0.5363 MESLQHNVDSIHSDRLPPSTLKRSTNFAADPNDHNSFHPVRWRSDTERRIYSSKLIEALRHVLCRSPSLPPKRGGGREIRETADRVLAATAKGRTRWSRAILASPLSRWRLQRQHKKVKKMTSGLKKPDIRKERRSPALQKKARVLGRLVPGCRKVSFPNLLEETTDYISALEMQIRAMTTLTELLAGGAAPADRLEGPRP 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0273 201 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 135 189 IPR036638 GO:0046983
Acco02g0273 201 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 123 172 IPR011598 GO:0046983
Acco02g0273 201 CDD bHLH_AtIBH1_like 131 183 IPR044549 GO:0006355
Acco02g0273 201 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 43 186 IPR044660 GO:0006355
Acco02g0273 201 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0273 Acco-ChrAcco02 2028593 2029198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0273 41 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 51.007 1.71e-38 130
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0273 02 2028593 2029198 Acco06g0252 06 1629214 1629822 CCT
Acco02g0273 02 2028593 2029198 Acco06g0252 06 1629214 1629822 ECH
Acco02g0273 02 2028593 2029198 Acco02g0273 02 2028593 2029198 ECH