Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco02g0251 | ATGACAAGTTCAAGCAATATCAAAACTGCTCGAACAGGAGAGGAGAAGCTAAGCTCACATGGGGTCACATTAACCAAAAGGGGCGCTTCTGAAGATCAACTTGAGGAGTTACTGTCGCCGTATAGTCAAGTGGTTGTATCGATGGCATCAGGGAAAAGGCCACCTCACTTCATGGGTCATGACAGGGACGGTGAAGCTCCTTGTAACAACTCTAAAAGGAGACAAAGCGACTATGTTCCCACACAAATTGTCACCAGTTATGAGGATGACATAAACAAAGGAGATAAAAAGTTGATGGAAAAGATTTTCGAGCCAATGTTTCGCAGAGCGGTTAGAGATGAATTCACAGCTGTACTGAAGCGACACCCTCACCTACAGCCAAGTCCAAGGTTTAGTTCTGTTTGTCCTGTTCCAGAACATCATTATAAATTCCCTGCAGGGTATTATCCATCTAAAATTGTTTTATGCGTTCAAATGTGTAGCGGACAAAGACAGAAAACCTTTCAACTACGTTTTAAGGAATCGCCCGGCGAGTCTTATACAGGCGTTAAAGTTGAGACTAAGAACGGTGCTTCACTTGAAGTTGCTCTGTATCAGTGTGATGAGGAACTTATAGTCACAGAAGGTCCTCTGTCCTCCGCAAGGGTAAAGCTGTACCTTTTACCGGGCAACTTCGGATCCGATGGTCGCAATGATTGGAGCTCCGAGGATTTCGGTCGCAGCACATTAAATCATACAAGGAAAGGCGGCGAATTACTGACTGGGGATCGGTCCCTTACACTGAAAAATGGAGTTGCCACTGTCAATGACATTTTTGTCCATGATATATCGACATGGGCGAAAACCCAACAATTCAGACTAGGAGCCAGAGTTGTGGAAACAATTCCTGAGACAGAGAGCATTAAGGAGGGAGTAAGTCAACCTTTTAGGGTCAAGGATTGTCGTGGACAGGGCTACCGGAAACATGGCACTCCGTCGTTAAATGATGCGATTTGGCGTTTGGAAGACATTGCCAAAGACGGAAAAAGACACAAATGGCTGTTATCCATAGGAATAGACACGGTCGGGGCTTTCTTGCATCAGCTTCGTACCAACCCATGTCACCTGAAACAGGGCCTTAAAAAAGTTGGAGTTGGAGATAATGTATGGAAAAACCTTATCCGCCAAGCTGCTAAAGCCAATACCAAACAAGATGCTAGGCAACCGGATCTTCTCACAGCGCCTCTTAACTCGGAGCCACAGGCATAATTTACCAATCACCGAGTCTTCTGTTTTGGGTTTCAGAATTTGGTGCAAGCAACAGGGCAGGGCCTGCCACAACAAGAACCTCTACTTGCTGTTCCCCAAAGTTTGAATGTCCCATCCCCGTACTTGGGTGAACAACTTGACTTCGACTTTCTGAATGATGTCTTGAACAATTCTTCTGCTCATGAAGGAAATAGTAGCTATGGATGTTCGGGCCCCAATTCTGGTGTGTACATATCAAGCAGAGGCAGTTGCACCACAATATGGGGTCAGATTCGAAGTGCTTTCAAAGCCACATGGACCTGCTCTTCGTTAAGTGGGTTGATGATCACGATGGATCTCCAGCAGAAGGAAACGTTTCATGAGGAATCGATTGATAACAAGAAGTGTTGCACTGACTGCAAAACTACTAAGACCCCACTCTGGAGAGGGGGACCTTCTGGGCCCAAGACTCTGTGCAACGCTTGCGGGATAAGATACAGGAAGAAAAGGGTTTCACCGGTGGGATTGAGATTGAACAGAGGACAAGAGAGGAAGAGAGACAAAAAACAGAATCGGAGTGGCGGTAGAGCTGTTGGTAATGACGGAGACTATTTGGAGGAGCGTTTGAAGATGAATTTGGTGGCATTAGGTGAGGAGGTTTTGCTGCAACGGTCACATTCGGCGGCAAAGAAGCAGAGGTGGCGTAGGAGGAGGAGGGAATTAGAGGAGGTGGAACAAGCCGCCTTCTGCCTGATGGCCTTGTCTTGTGGACTTGTTTTCGCTTGA | 2013 | 0.4645 | MTSSSNIKTARTGEEKLSSHGVTLTKRGASEDQLEELLSPYSQVVVSMASGKRPPHFMGHDRDGEAPCNNSKRRQSDYVPTQIVTSYEDDINKGDKKLMEKIFEPMFRRAVRDEFTAVLKRHPHLQPSPRFSSVCPVPEHHYKFPAGYYPSKIVLCVQMCSGQRQKTFQLRFKESPGESYTGVKVETKNGASLEVALYQCDEELIVTEGPLSSARVKLYLLPGNFGSDGRNDWSSEDFGRSTLNHTRKGGELLTGDRSLTLKNGVATVNDIFVHDISTWAKTQQFRLGARVVETIPETESIKEGVSQPFRVKDCRGQGYRKHGTPSLNDAIWRLEDIAKDGKRHKWLLSIGIDTVGAFLHQLRTNPCHLKQGLKKVGVGDNVWKNLIRQAAKANTKQDARQPDLLTAPLNSEPQAXFTNHRVFCFGFQNLVQATGQGLPQQEPLLAVPQSLNVPSPYLGEQLDFDFLNDVLNNSSAHEGNSSYGCSGPNSGVYISSRGSCTTIWGQIRSAFKATWTCSSLSGLMITMDLQQKETFHEESIDNKKCCTDCKTTKTPLWRGGPSGPKTLCNACGIRYRKKRVSPVGLRLNRGQERKRDKKQNRSGGRAVGNDGDYLEERLKMNLVALGEEVLLQRSHSAAKKQRWRRRRRELEEVEQAAFCLMALSCGLVFA | 670 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco02g0251 | 670 | Pfam | GATA zinc finger | 546 | 580 | IPR000679 | GO:0006355|GO:0043565 | |
Acco02g0251 | 670 | ProSitePatterns | GATA-type zinc finger domain. | 546 | 571 | IPR000679 | GO:0006355|GO:0043565 | |
Acco02g0251 | 670 | MobiDBLite | consensus disorder prediction | 55 | 70 | - | - | |
Acco02g0251 | 670 | Gene3D | - | 541 | 603 | IPR013088 | GO:0006355|GO:0008270 | |
Acco02g0251 | 670 | Pfam | Calmodulin binding protein-like N-terminal domain | 168 | 313 | IPR046831 | - | |
Acco02g0251 | 670 | ProSiteProfiles | GATA-type zinc finger domain profile. | 546 | 576 | IPR000679 | GO:0006355|GO:0043565 | |
Acco02g0251 | 670 | Pfam | Calmodulin binding protein central domain | 326 | 391 | IPR046830 | - | |
Acco02g0251 | 670 | CDD | ZnF_GATA | 546 | 597 | IPR000679 | GO:0006355|GO:0043565 | |
Acco02g0251 | 670 | MobiDBLite | consensus disorder prediction | 591 | 610 | - | - | |
Acco02g0251 | 670 | PANTHER | OS02G0177800 PROTEIN | 84 | 396 | IPR012416 | GO:0005516 | |
Acco02g0251 | 670 | SMART | GATA_3 | 540 | 598 | IPR000679 | GO:0006355|GO:0043565 | |
Acco02g0251 | 670 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Acco02g0251 | 670 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 541 | 580 | - | - | |
Acco02g0251 | 670 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Acco02g0251 | 670 | MobiDBLite | consensus disorder prediction | 52 | 73 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco02g0251 | Acco-ChrAcco02 | 1856443 | 1862480 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco02g0251 | 103 | 390 | Calmodulin-binding Proteins | AT4G25800 | 33.564 | 9.05e-39 | 150 |