Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0232 ATGTTGATCAATTATTACTTTATGACTATTCTGGAATGTGAGACAACCGTCGGCGGAGATTTCTTTGTTGCGATGAAGATTGGGTTTGAGAACTCGGCTGGACCCGAGAAGCATCAAGCTGTAGCCCTGAGAGTGCAAGGTGACATGGCGGTGTTGTACAAATGCGCCATGGATGGTTACCAGGACACACTCTACGCACACGCGATGTGTCAATTCTATAGGGACTTTACCATTTCCGGTACGGTGGACTTCATCTTCGGCGATTCCGTGTCGGTGTTCCAGAACTGCACATTTGTGGTGAGGAAGCCATTGGAGGAACAACAATGCATCGTGACGGCGCAGGGAAGGAAGGAAAGGCACTAG 363 0.4931 MLINYYFMTILECETTVGGDFFVAMKIGFENSAGPEKHQAVALRVQGDMAVLYKCAMDGYQDTLYAHAMCQFYRDFTISGTVDFIFGDSVSVFQNCTFVVRKPLEEQQCIVTAQGRKERH 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0232 120 Gene3D - 9 120 IPR012334 -
Acco02g0232 120 Pfam Pectinesterase 14 119 IPR000070 GO:0030599|GO:0042545
Acco02g0232 120 PANTHER PECTINESTERASE 15 119 - -
Acco02g0232 120 ProSitePatterns Pectinesterase signature 2. 78 87 IPR033131 -
Acco02g0232 120 SUPERFAMILY Pectin lyase-like 16 117 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0232 Acco-ChrAcco02 1732652 1735551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0232 3 119 Carbohydrate Esterase AT5G49180 59.167 1.74e-48 160