Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0197 ATGGAGGACGAGAGGCTGTTGCCGATTGCAAACGTGGGAAGGATAATGAGGCAAATACTTCCCGCGAGTGCGAAGATCTCAAAAGAAGGGAAGCAGATAATGCAAGAATGTGCGACTGAGTTCATAAGCTTTGTGACGGAAGAAGCTTCTGACAAGTGTCACAAAGAGAATCGCAAGACCCTCAATGGGGATGACATCTGCTGGGCCCTAAGCGCCTTAGGGTTTGATAATTATGCTGAGGCCATTGCGAGGTACTTGCATAAATACAGGCAAGCTGAGAGACACAAAATGATCAATCTCCAGAAAACTAACAACAAAGCTCATGATCTTCAAACGCATCACTACTTGCTACAGAATTCTCCGGCCGCCTCCCTCGTCCAAAGCGACAGGCAGCAGAATGACATTTGTGCTGCGGCATCAGAGAATAGGGTTTCTGATGATCAAGAGAAGGCTCCTGCAACTAATTAA 468 0.4679 MEDERLLPIANVGRIMRQILPASAKISKEGKQIMQECATEFISFVTEEASDKCHKENRKTLNGDDICWALSALGFDNYAEAIARYLHKYRQAERHKMINLQKTNNKAHDLQTHHYLLQNSPAASLVQSDRQQNDICAAASENRVSDDQEKAPATN 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0197 155 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 2 127 IPR027113 GO:0001228|GO:0006355|GO:0016602
Acco02g0197 155 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 70 IPR003958 -
Acco02g0197 155 Gene3D Histone, subunit A 1 151 IPR009072 GO:0046982
Acco02g0197 155 PRINTS CCAAT-binding transcription factor subunit A signature 34 52 - -
Acco02g0197 155 PRINTS CCAAT-binding transcription factor subunit A signature 72 90 - -
Acco02g0197 155 PRINTS CCAAT-binding transcription factor subunit A signature 53 71 - -
Acco02g0197 155 SUPERFAMILY Histone-fold 3 105 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0197 Acco-ChrAcco02 1466086 1466553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0197 1 113 CCAAT-HAP3 Transcription Factor Family AT1G09030 66.667 7.13e-54 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Acco02g0197 CBFD_NFYB_HMF 2.3e-24 CL0012