Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0192 ATGGCAGACTCGCAGGGTGATTCGAAAATGTTCAGCGTTCGGATCGTGTCCATCGACTACTACATGGCACCGCCCGTTCCAGGCCTGGATATCTGTTACAGCAGTTTTCATGGTGGGAAGGTGAATGAGGTTCCAGTTGTAAGAATATATGGTTCTACTCCAGCAGGGCAGAAAACTTGTTTGCATATGCATCGGGCTTTGCCCTACATTTATGTGCCATGTGCTGATATACCCCTTCAGTCAGATCAAGAAGATGTGTACACATATAAGGTATCTGCATCTCTTGAGAAGGCATTGGAGCTAAAAGGCAGCAGTGGTTTGACAAGACGACATGTACATGGCTGCAGCCTTGTAAGAGCAAGGAGATTTTATGGCTATCATTCATCAGATGAGTTATTTGTGAAGATATACCTATATTATCCACAAGATGTCTCCCGTGCCGCTAATCTACTATTGGCTGGTGCTGTTCTTGGCAAAAGCTTACAGCCCCATGAATCACATATTCCCTTCATTCTTCAGTTTCTGGTTGATTATAACTTGTATGGCATGGGTCATCTGCACTTGTTAAAGATGAAGTTCCGCCATCCTATGCCAGATTTTTCTCACACAAAATCGATTTTCACTGGTCAACAGACAGGGTCAGCAGTGTGGACATCATCAATGGTCTCATCTGATTGGATGTGGCACCTTCCTTCTGAATTGGATGCTTCATCAAATCATGAGGCTTATTGCCCAAAACGTCAAAGCACATGTGAACTGGAGGGCGATGCTTCTGTAGATGAGATTCTTAATCAGCAGTTCAAAATGTATTCATCCCTCTCACAAACTCGATCAGATGTGCAAATGGTTCAGTCTCTTGTACCAATCTGGAAGGAGCAGCAAGAAAGGACTGGAATTTATGAGGATACTATACCTCCTGATCCTGGGAAGCCACTGCCAGAAGTTGTTATGAGAAGTCTTTCTGCTGGTCTCGACTTTGAGAAAAAGTTTGTTGAACTGTGCTGTGAAGCTGAAACCTGTGCATCCTTTACTTCCTTTGAGGAGCTGAGAGAAACAGACATAATAGGTTCAGCATCACCACCGGCTTCAATGTGCAAAGATGCCAAATTGCATGAAGAAGGGACAGAGGCAAATCTCAGATTGTTGACTGTTGATGAAACGCAACCATCTGAGATTACTGGAACACAGGGCGTAAAGGCGGCAGATAAGGAAGTATTGAATCTCCTAAAGTGGCTTGCAACTTCTCAAGCTGCAGAGGATATCAACTCGGATGATGAGCTTGTTCGTGAAACCATTTTGAGTCCCTTATTACCTGCTACAACAATTGATCAGGTGCTGGAGAAAGCTAATATAGATTACGAGAGTGAGTCCCAGAAGGAGTGTCAAGATATTCTTGACTCCATTGATGATCAATGTCAGTTGGAGTCATCAAAGAGGACTCCACCTTTTTCCTCAAATTTTGATCATCCTGTTGAGTCTTCAAAGAATTTGATTCCTCAAGTTGATGGTTCTGCTGATGATGAGTTTTCAAGTCCAAGTGCCAATTCAGCTGGAATTTCATTTTCACTGGACGAAAAAGGTGAATCCAAAAGGTCTTCCAAATACCGTACACTGCAAAATACCAGACCCAACTCTCATAGCAAAGGTAACAAGAACAAAGTATGGGGCTCTTTACCATTTTCAATGTCCCATAACAGTTTTGAACATGCTAGCTTGCATGTTGCTCCTACATCTGAAAGGAAAACTGGAGAATCTGCTGACTCAGTTTGTTTGGCCAGAAATGAGACAGAGAATAATGGCATAAATAATGGGGATCGAGGTGCTTCAGACTTGAAGGAAGTACATACGCTGGATAATTGCTCTGTGCGGGACTTGATGAGAAGAAAGAGATGTTATCGAGTCGAGCAAACTGACCATGAATCTGAAATAACTAAAAAACTACTCTTTGATGGGGACGAGAAGCTGAAAACTGATGAAGGAGAAACAGAAGTCCAGAAGAGCTGTGTTCTGAAAATGAGCAATTGTGATTTTCTGTGTAGGAAATCACCCCTTGTAGTTGGCAGTTGTACTGGACCGACTTTCTCTGAGCTGAAGAAGTTTCACTCTACTAGTTCTTTTGATCACTCAGCGGTTTCCAGTGGTAAAAAGTTTAAGGTTGACTCAACATGTGTACAAACTGACAAGTGTCAACGAATTGATACTGCAGCCTTAGGTAGTGTAGAAAGCTCTTCTATTGAGAATTTAGGGTCTGGAAGAAGTAATTGCATGTATAAATGTCCTCATGGAAGCAAATCTTATGAGCAACATGGTCAGACGGAGTCATATGAGAATGCCGTAGGTGTGAATGCCGCAACTGGCATTCAAGTATTGCAATGTGTAAAAAGTGATGAGGAAAAACCTAGAGAGAAATTGGGTTTTTCTGAGACTATTGGAATGGAACCCTTTGTCAATGACATGATTGGTAATCACATGAGATTAACCTCTGGCAGGACAGATGCCTTGGCAGTGAAAGCTCTGGATGATGTTATTCCTGCTTCTGCCGGTGGTTCCCAGAATGAGTTAGAAACTTGGGACGAGCACGTTGCCAATAATGCCCCAGGTCCTGAAGGGAAAAAGTTATTGGGTGATGCAACTTATTACCAAAATGATGGCTCTCATCTATGTGTATTGAAACCCAAAATTTTGCCTCCTTCTGCAGGTAGTGTTCAGAGATGGCTACTTTGTGATGAGAGAGATAAAATGTTACAAGAAACTGATGCAAAGGAGACACATTTGCCTAAATGGAATACAAGACCTTGTCTTATGTCTAAGCATGTCCATGATGTTGATTCTGAAAAGAAGACCCCATGCATCAGTGGTGGACAAATGGATCTAATCAAAACATGCATGGATGGCTCACAAGATGCTCCTCAAATATCAGGCCCTGATGTGAAATCAAGGTCTACTCCTCTAAGTCAAATTGGATTTCGTGATCCTGCAAGTACTGGCTGTGGACAGCAATTGACGTTACTCAGTATAGAGGTTCTTGCAGAATCAAGAGGAGAACTTTTACCTGATCCCCGGTTTGATGCCATCAATGTTGTAGCTCTGGGTTTTCAAAATGATAGTGACACTATTGTTGACGTTCTTGTCCTTTTGCATTGTAAACCAGAAACTTGTCAAAGAAATTTTGGAGGTCTATCAGGTTGCAAGGTGTTGATCTTCACGGAGGAAAAGTACTTGCTAAAAAAATTTATTAAGATTGTGTCTTCATCGGATCCAGATATTCTGATGGGTTGGGATATTCAAGGTGGTTCTCTTGGATTTTTAGCGGAAAGGGCTTCGCATCTTGGATTAGGATTACTTAATAACTTATCTCGTACTCCATCTGAGATTTGGATTACCTCTGATGATGCTGAAACTTCTGAAAAAGGTATGTCAGAAACTGCCATTCCTGATATATCTAGCGCAGATGATGTACAAGAAAGTTCAATAATTGAGGATGAATGGGGACGTACACATGCCAGTGGAGTTCATGTTGGTGGCAGAATTGTTCTTAATGTGTGGCGACTTATCCGTGGAGAAGTTAAGCTCAATTTATACTCAGTTGAAGCTGTAGCTGAAGCTGTATTGAGGAGGAAAGTTCCTTCAATTCACAGCAAGGTTCTGACCAAATGGTTTTCTGGTGGTCCTGGACGAGCAAGATATCGGTGTGTTGAATATATTACTGAGAGAGCAAAGCTGAATCTTGAGATATTAAGTCAACTTGATATGGTAAATCGAACATCAGAACTTGCTCGCATTTTTGGTATAGATTTTTTTTCTGTTCTCTCCAGAGGTTCCCAATATCGTGTTGAATCAATGTTTCTGAGGTTGGCACATACGCAAAACTATCTTGCCATCTCTCCTGGGAATCAACAGGTTGCTTCTCAACCTGCCATGGAGTGCCTACCCCTTGTGATGGAACCAGAGTCAGGATTTTATTTGAACCCGGTTGTTGTATTTGACTTTCAGTCATTATATCCATCCATGATAATTGCTTACAACCTTTGCTTTTGTACGTGCCTTGGCAAAGCTGTGGCATCAAAAGCAAACACGCTCGGGGTTAGTTCATTTTCGCCGGAGCAGCATGTTCTGCGGGATTTAAAAGATCAAATCTTGCTTACTCCAAATGGTGTTATGTTTGTTCCTTCCAAGGTTCGTCGAGGTATACTACCACGCTTGTTGGAAGAAATTTTATCAACCAGGATAATGGTGAAACAGGCAATGAAAAAGTTGGCTCCTTCACAGCAAGTCCTTCAGCGGATATTTAACGCAAGACAGCTTGCTTTGAAGCTTATATCAAATGTTACATATGGCTACACTGCTGCTGGATTTAGTGGTCGTATGCCTTGCGCAGAGCTTGCAGACAGTATTGTTCAATGCGGCCGTTGCACGTTGGAAAGGGCAATATCATTTGTAAATCAACACGATAAGTGGAATGCAAGAGTCATTTATGGAGATACGGATAGCATGTTTGTTCTCCTCAAAGGACGCACCATTAAAGAATGTTTCCAAATTGGGAGTGAGATTGTTTCTGCTGTCACTGCAATGAACCCAAGTCCTGTCACCCTGAAGTTGGAGAAAGTTTATCAGCCTTGTTTCCTCCTTACTAAGAAGCGGTATGTTGGTTATAGTTATGAAAGCCCTGATCAAGTTGAGCCAGTTTTTGATGCTAAAGGTATTGAGACCGTTCGTAGAGACACATGTGGTGCAGTTGCAAAGATAATGGAACAGTCTTTAAGGCTCTTTTTTGAAAATCAGGATTTGTCAGAGGTGAAAAGTTATTTACAACGTCAGTGGAAGAGAATTCTTTCAGGCAAAGTCTCTATTAAAGATTTTGTCTTTGCTAAGGAGGTTCGCCTAGGTAGCTATAGTGCCAGGACATCGTCATCTTTACCTCCAGCTGCAATTGTTGCCACCAAGGCAATGAGGTTTGACCCTAGGACAGAACCACGTTATGCTGAGAGAGTACCTTATGTTGTAATCCATGGAGAGCCTGGAGCCCGCCTGGTTGACATGGTTGTGGATCCATTGGAAGTTTTGGCACTTGATACCCCATTCAGAATAAATGACTTGTATTACATTAACAAACAAATAATACCTGCTTTGCAGCGGGTGTTTGGGCTTGTTGGTGCTAACCTGAACCAATGGTTCTTAGAGATGCCCCGTCCTTTAAAGGAAGCCCATGTAAAGCATCTCGTTGCACCCAATTCACATCGAATGAGAATTGACTCGTATTATCTGTCAAAGCATTGTATGCTGTGTGGTGGATTGGTTCAAGCATCTGCGCATATATGCATTCAGTGTTCTGAAAATGGAGTGGCTGCAGCAACGGCTGTGATTAGTAAAACATCAAAGTTGGAACAAGAGATGCAGCATCTTTTTGCAATATGTGATCATTGTGGAGGTGGAGACAGGCTTCTGGAAAGTGATGTAAAGTGCACATCAATTTCATGCTCGGTGTTTTATGAGAGACGAAAAGTTCAGAAAGAACTACTAGCTATGAACAATGTTGCTGCTGGTCAAGGCTTCTATCCAAAATGCATGGTCGAGTGGTTCTGA 5583 0.4211 MADSQGDSKMFSVRIVSIDYYMAPPVPGLDICYSSFHGGKVNEVPVVRIYGSTPAGQKTCLHMHRALPYIYVPCADIPLQSDQEDVYTYKVSASLEKALELKGSSGLTRRHVHGCSLVRARRFYGYHSSDELFVKIYLYYPQDVSRAANLLLAGAVLGKSLQPHESHIPFILQFLVDYNLYGMGHLHLLKMKFRHPMPDFSHTKSIFTGQQTGSAVWTSSMVSSDWMWHLPSELDASSNHEAYCPKRQSTCELEGDASVDEILNQQFKMYSSLSQTRSDVQMVQSLVPIWKEQQERTGIYEDTIPPDPGKPLPEVVMRSLSAGLDFEKKFVELCCEAETCASFTSFEELRETDIIGSASPPASMCKDAKLHEEGTEANLRLLTVDETQPSEITGTQGVKAADKEVLNLLKWLATSQAAEDINSDDELVRETILSPLLPATTIDQVLEKANIDYESESQKECQDILDSIDDQCQLESSKRTPPFSSNFDHPVESSKNLIPQVDGSADDEFSSPSANSAGISFSLDEKGESKRSSKYRTLQNTRPNSHSKGNKNKVWGSLPFSMSHNSFEHASLHVAPTSERKTGESADSVCLARNETENNGINNGDRGASDLKEVHTLDNCSVRDLMRRKRCYRVEQTDHESEITKKLLFDGDEKLKTDEGETEVQKSCVLKMSNCDFLCRKSPLVVGSCTGPTFSELKKFHSTSSFDHSAVSSGKKFKVDSTCVQTDKCQRIDTAALGSVESSSIENLGSGRSNCMYKCPHGSKSYEQHGQTESYENAVGVNAATGIQVLQCVKSDEEKPREKLGFSETIGMEPFVNDMIGNHMRLTSGRTDALAVKALDDVIPASAGGSQNELETWDEHVANNAPGPEGKKLLGDATYYQNDGSHLCVLKPKILPPSAGSVQRWLLCDERDKMLQETDAKETHLPKWNTRPCLMSKHVHDVDSEKKTPCISGGQMDLIKTCMDGSQDAPQISGPDVKSRSTPLSQIGFRDPASTGCGQQLTLLSIEVLAESRGELLPDPRFDAINVVALGFQNDSDTIVDVLVLLHCKPETCQRNFGGLSGCKVLIFTEEKYLLKKFIKIVSSSDPDILMGWDIQGGSLGFLAERASHLGLGLLNNLSRTPSEIWITSDDAETSEKGMSETAIPDISSADDVQESSIIEDEWGRTHASGVHVGGRIVLNVWRLIRGEVKLNLYSVEAVAEAVLRRKVPSIHSKVLTKWFSGGPGRARYRCVEYITERAKLNLEILSQLDMVNRTSELARIFGIDFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESGFYLNPVVVFDFQSLYPSMIIAYNLCFCTCLGKAVASKANTLGVSSFSPEQHVLRDLKDQILLTPNGVMFVPSKVRRGILPRLLEEILSTRIMVKQAMKKLAPSQQVLQRIFNARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLERAISFVNQHDKWNARVIYGDTDSMFVLLKGRTIKECFQIGSEIVSAVTAMNPSPVTLKLEKVYQPCFLLTKKRYVGYSYESPDQVEPVFDAKGIETVRRDTCGAVAKIMEQSLRLFFENQDLSEVKSYLQRQWKRILSGKVSIKDFVFAKEVRLGSYSARTSSSLPPAAIVATKAMRFDPRTEPRYAERVPYVVIHGEPGARLVDMVVDPLEVLALDTPFRINDLYYINKQIIPALQRVFGLVGANLNQWFLEMPRPLKEAHVKHLVAPNSHRMRIDSYYLSKHCMLCGGLVQASAHICIQCSENGVAAATAVISKTSKLEQEMQHLFAICDHCGGGDRLLESDVKCTSISCSVFYERRKVQKELLAMNNVAAGQGFYPKCMVEWF 1860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0192 1860 PRINTS DNA-directed DNA-polymerase family B signature 1490 1498 IPR006172 GO:0000166|GO:0003676|GO:0003887
Acco02g0192 1860 PRINTS DNA-directed DNA-polymerase family B signature 1434 1446 IPR006172 GO:0000166|GO:0003676|GO:0003887
Acco02g0192 1860 PRINTS DNA-directed DNA-polymerase family B signature 1325 1338 IPR006172 GO:0000166|GO:0003676|GO:0003887
Acco02g0192 1860 MobiDBLite consensus disorder prediction 536 552 - -
Acco02g0192 1860 Gene3D Palm domain of DNA polymerase 1311 1556 IPR023211 -
Acco02g0192 1860 ProSitePatterns DNA polymerase family B signature. 1492 1500 IPR017964 GO:0000166|GO:0003676
Acco02g0192 1860 MobiDBLite consensus disorder prediction 475 552 - -
Acco02g0192 1860 Pfam C4-type zinc-finger of DNA polymerase delta 1759 1832 IPR025687 -
Acco02g0192 1860 Pfam DNA polymerase family B 1266 1714 IPR006134 GO:0000166|GO:0003677
Acco02g0192 1860 PANTHER DNA POLYMERASE ZETA CATALYTIC SUBUNIT 6 1852 IPR030559 GO:0006281|GO:0016035|GO:0019985
Acco02g0192 1860 FunFam DNA polymerase 30 195 - -
Acco02g0192 1860 Gene3D DNA Polymerase, chain B, domain 1 29 195 - -
Acco02g0192 1860 FunFam DNA polymerase 1008 1308 - -
Acco02g0192 1860 FunFam DNA polymerase zeta 1392 1451 - -
Acco02g0192 1860 CDD POLBc_zeta 1273 1722 - -
Acco02g0192 1860 CDD DNA_polB_zeta_exo 998 1247 - -
Acco02g0192 1860 MobiDBLite consensus disorder prediction 475 522 - -
Acco02g0192 1860 Gene3D Helix hairpin bin 1391 1451 - -
Acco02g0192 1860 SUPERFAMILY Ribonuclease H-like 36 1272 IPR012337 -
Acco02g0192 1860 Pfam DNA polymerase family B, exonuclease domain 1000 1131 IPR006133 -
Acco02g0192 1860 FunFam DNA polymerase 1567 1736 - -
Acco02g0192 1860 Gene3D - 1032 1308 IPR036397 GO:0003676
Acco02g0192 1860 SMART polmehr3 999 1504 IPR006172 GO:0000166|GO:0003676|GO:0003887
Acco02g0192 1860 Gene3D - 1567 1731 IPR042087 -
Acco02g0192 1860 SUPERFAMILY DNA/RNA polymerases 1312 1725 IPR043502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0192 Acco-ChrAcco02 1432784 1447305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0192 39 207 Core DNA Replication Machinery Family AT5G63960 24.713 3.66e-09 60.1