Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0174 ATGGGGGACCGTGGCAGTGGAGCTCAGTTGCCTTGTAGTTCTAATCCTTACCAACCAAGCCAAATATCTGATAGCGCAAACACATCTATGGGTGTTGGTGGCATTGGAGCTCAGCCAAGCCAAGTATCTGATGGCGCAAACGCATCTATGGGTGTTGGTGGCATTGGAGCTCAGCCAAGGCAAATATCTGATAGCGCAAACACATATATGGGTGTTGGTGGCATTGGAGCTCAGCTGCATTATGGTTCTAACCCTTACCAGCCAAGGCAAATATCTGATAGCGCAAACCCATCTATGGGTGTTGGTGGCATTGGAGCTCAGTTGCATTATGGTTCTAACCCTTACCAGCCAAGGCAAATATCTGATAGCGCAATCCCATCTATGGGTGTTGGTGGCATTGGAGCTCAGCTGCATTATGGTTCTAACCCTTACCAGACAAGGCAAATATCTGATAGCGCAAACACATTTATAGGGTTTGCCGGCAGTGGAGCTCAGTTGCATTATGGTTCTAACCCTTTCCAGCCAAGGCAAATATCTGATAGCGCAAACCCATCTATGGTTGTTGGTGGCATTGGAGCTCAGCTGCATTATGGTTCTAACCCTTACCAGACAAGGCAAATATCTGATAGCGCAAACACATCTATAAGGGTTGCCGGCAGTGGAGCTCAGTTGCATTATGGTTCTAACCCTTACCAGCCAAGGAAAATATCTGATAGCGCAAACCCATCAATGGGTGTTGGTCGCAGAGGAGCTCATTCGCCTTATGGTTCTAATCCTTACCAGCCAAGGCAAATATCTGATAGCGCAAACCCATCAATAGGTGTTGGTCGCAGAGGAGCTCATTCGCCTTATGGTTCTAATCCTTACCAGCCAAGGCAAATATCTGATAGCGCAAACCCATCTATGGGTGTTGGTCGCAGAGGAGCTCATTCGCCTTATGGTTCTAGTCCTTACCAGCCAAGGCAAATATCTGATAGCGCAAACCCATCTATGGGTGTTGGTCGCAGAGGAGCTCATTCGCCTTATGGTTCTAATCCTTACCAGCCAAGGCAAATATCTGATAGCGCAAACCCCTCTATTGGTGTTGGTCGCAGAGGAGCTCATTCATCTTATGGTTCTAATCCTTACCAACCAAGGCAAATATCTTATAGCGCAAACCCATCCATGGGTGTTGGTCGCAGAGGAGCTCATTCGCCTTATGGTTCTAATCCTTACCAGCCAAGGCAAATATCTTATAGCGCAAACCCATATATGGGGGTTGGTGGCACTGAAGTTCAGTTGCCTTATGGTTTTAATCCTAATTACCAGAGAAGGCAAATATCTTATAGCGCAAACCCATCTATGGGGGTTGGTGGCAGTGAAGTTCAGTTGCGTTGTGGTTTTAATCCTTACGAGCCAAGCCAAATATCTGGGCCTTCTGGTTCTGTTGTTGCATCTTCTGGGGCCATTCAAACTACTAGCCAGCCTGCAGGAGGTAATCCGCAACAGTTGCAGCAGCAACCCAAAACCTTTGGGAAAAATCAATACCAAGAAAGTGAGGGGGTAGCTGATTTCAAGAACCTGGTGTGTGGGATCAGGAAGCTTATGAGAGCCGATGAAGATGTCGAGGCAATATCACATGAGGCACCTGTTATACTGGCAAGGGCGTGTGAAATGTTCATATCAGATTTGACCTTGCGTTCTTGGAACCACTATGAGAAAAAGAAAAGGAAAACACTACACAAAGATGATATCGCAGCAGCAATCACAGAGACTGACTTGGAGTTTTTGGTTGATAGTGAGCCCCAGGAGGACTTGAAAGATGAAGTACTTGCATCAATCCCTAGAGGAACCATGCCAGTTGCGGGTCCTGTTGATGATTTTCCTTCTTGGTTTATTTCAGCACAGCATGCTCCTCAAGTTGGCGCTACCGGGGTCATCATGGATTCAGATGCATCAAATCCTAGAGGAACCATGCTAGGTGCAGATCCTGATGATGATTTTCCTTTTACCTATCTTTCAAATTCACCACAGTATGCTCCTCAAGATGGCGGGGCCATCATGGCCACGGGTGGGCCTGTAATGGACCCGAACGTATCTCCTCAACAGCCGCATTCCGACATGTCACAACAAATGTGGCCACACCCACAAGAGCATCAACAACCATTTCCAGATCATTAG 2160 0.4708 MGDRGSGAQLPCSSNPYQPSQISDSANTSMGVGGIGAQPSQVSDGANASMGVGGIGAQPRQISDSANTYMGVGGIGAQLHYGSNPYQPRQISDSANPSMGVGGIGAQLHYGSNPYQPRQISDSAIPSMGVGGIGAQLHYGSNPYQTRQISDSANTFIGFAGSGAQLHYGSNPFQPRQISDSANPSMVVGGIGAQLHYGSNPYQTRQISDSANTSIRVAGSGAQLHYGSNPYQPRKISDSANPSMGVGRRGAHSPYGSNPYQPRQISDSANPSIGVGRRGAHSPYGSNPYQPRQISDSANPSMGVGRRGAHSPYGSSPYQPRQISDSANPSMGVGRRGAHSPYGSNPYQPRQISDSANPSIGVGRRGAHSSYGSNPYQPRQISYSANPSMGVGRRGAHSPYGSNPYQPRQISYSANPYMGVGGTEVQLPYGFNPNYQRRQISYSANPSMGVGGSEVQLRCGFNPYEPSQISGPSGSVVASSGAIQTTSQPAGGNPQQLQQQPKTFGKNQYQESEGVADFKNLVCGIRKLMRADEDVEAISHEAPVILARACEMFISDLTLRSWNHYEKKKRKTLHKDDIAAAITETDLEFLVDSEPQEDLKDEVLASIPRGTMPVAGPVDDFPSWFISAQHAPQVGATGVIMDSDASNPRGTMLGADPDDDFPFTYLSNSPQYAPQDGGAIMATGGPVMDPNVSPQQPHSDMSQQMWPHPQEHQQPFPDH 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0174 719 MobiDBLite consensus disorder prediction 315 329 - -
Acco02g0174 719 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 525 582 IPR003958 -
Acco02g0174 719 MobiDBLite consensus disorder prediction 670 719 - -
Acco02g0174 719 MobiDBLite consensus disorder prediction 286 300 - -
Acco02g0174 719 MobiDBLite consensus disorder prediction 689 710 - -
Acco02g0174 719 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 495 613 - -
Acco02g0174 719 MobiDBLite consensus disorder prediction 344 358 - -
Acco02g0174 719 MobiDBLite consensus disorder prediction 8 45 - -
Acco02g0174 719 MobiDBLite consensus disorder prediction 470 500 - -
Acco02g0174 719 MobiDBLite consensus disorder prediction 257 271 - -
Acco02g0174 719 MobiDBLite consensus disorder prediction 223 401 - -
Acco02g0174 719 MobiDBLite consensus disorder prediction 370 387 - -
Acco02g0174 719 MobiDBLite consensus disorder prediction 1 45 - -
Acco02g0174 719 MobiDBLite consensus disorder prediction 223 239 - -
Acco02g0174 719 SUPERFAMILY Histone-fold 508 587 IPR009072 GO:0046982
Acco02g0174 719 Gene3D Histone, subunit A 492 595 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0174 Acco-ChrAcco02 1307350 1309989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0174 504 641 CCAAT-HAP5 Transcription Factor Family AT1G08970 56.338 2.17e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Acco02g0174 CBFD_NFYB_HMF 2.1e-14 CL0012