Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0167 ATGGAAATGAATACCAGTTTTGCTGTAGCCGCAGAATCACCCAGTGTTGCTTCCACACGGAACCACTCACAGCTCGAAGAGCACAAGCAGCATCATCACCATCATCCCCACTTCCCCTCCAAAACCATTCTCATAGTGGTTATAACCCTCACTTCCTTCATGCTTCTCCTTGCCATTTCTCTCATCATTTTCCTCCTCCGTCGCCTCAAATCCTCCTCCAAGAATCCAACCACTAAACTCGGCGGGGAAGAGTTTCACGATACCAGTAGCAGATTCGTCGCCTCATCAACAGCTTCCAACTTCACTCTTAGCCCAGATGTGAGGGGTGGCTGTATGTATGGAGGAAACATGAACAGAGCATCTGCACCTAAATTCAGGGGAGTGCAAGTGTTCACATATAAGGAGCTACAAGTGGCGACAGAGGGATTCAGTGAAGCCAATATAATTAGCAATAATGGAGGATTTGGTTTGGTGTACAAGGGAGTCTTAAGTGATGGCACTCTGGCCGCCATTAAGCTGTTGCAGAGACAAGGTAAGCAAGGCGAGCGTGCCTTCAGAATAGAGGTGGATCTTCTAAGCCGATTGCACTCTCCTTATTTGGTGGGGTTAATTGGGTATTGCGCTGATCAGCACCACAGGCTCCTCGTCTTTGAATATGTGGCCAATGGGACGCTCCGGCACCATCTTCACTCTGCCCACGATCGTGCCCAGCCGTTGGATTGGTGGACCCGCATGAGGGTGGCCCTTGATTGTGCCAGGGCCTTAGAGTTCCTGCACGAGCATGCCGCCACGCCTGTGATACACCGCGACTTCAAGTCCCACAATGTCGTGCTGGATCATAACTTCCGAGCCAAGGTTTCTGACTTTGGATTGGCCAGGATGGGCTCAGAAAAGATCAACGGTCTAGTTTCCACCAGGGTTTTGGGGACCACTGGATACCTGGCACCAGAGTATGCATCTACAGGGAAGCTTACCACAAAGTCAGATGTATACAGCTACGGTGTGGTTCTTCTAGAGTTGCTGACGGGGCGAGTGCCCGTTGATATTAAGCGCCCCCCTGGAGAACATGTCCTTGTCTCTTGGGCTCTTCCGAGGTTAACAAACAGAGAAAAGGTGGTGGAAATGGTTGATCCAGCTCTGCGAGGACAGTATTCTAAGAAGGATCTAGTGCAGGTGGCGGCCATAGCAGCAATGTGCATACAGCCAGAGGCAGATTATAGACCGCTAATGACAGATGTAGTGCAGTCACTAGTACCGCTAGTTAGAAACCCATCTTCTGTTAGTTCTTCCAGTTCATTAAGATTTCAGAAACATTCATCAAGTCCAAGCCATTAA 1335 0.4966 MEMNTSFAVAAESPSVASTRNHSQLEEHKQHHHHHPHFPSKTILIVVITLTSFMLLLAISLIIFLLRRLKSSSKNPTTKLGGEEFHDTSSRFVASSTASNFTLSPDVRGGCMYGGNMNRASAPKFRGVQVFTYKELQVATEGFSEANIISNNGGFGLVYKGVLSDGTLAAIKLLQRQGKQGERAFRIEVDLLSRLHSPYLVGLIGYCADQHHRLLVFEYVANGTLRHHLHSAHDRAQPLDWWTRMRVALDCARALEFLHEHAATPVIHRDFKSHNVVLDHNFRAKVSDFGLARMGSEKINGLVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPPGEHVLVSWALPRLTNREKVVEMVDPALRGQYSKKDLVQVAAIAAMCIQPEADYRPLMTDVVQSLVPLVRNPSSVSSSSSLRFQKHSSSPSH 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0167 444 Gene3D Phosphorylase Kinase; domain 1 115 219 - -
Acco02g0167 444 PANTHER OS07G0668900 PROTEIN 91 428 - -
Acco02g0167 444 Pfam Protein tyrosine and serine/threonine kinase 152 417 IPR001245 GO:0004672|GO:0006468
Acco02g0167 444 ProSiteProfiles Protein kinase domain profile. 144 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0167 444 MobiDBLite consensus disorder prediction 1 21 - -
Acco02g0167 444 MobiDBLite consensus disorder prediction 1 36 - -
Acco02g0167 444 Gene3D Transferase(Phosphotransferase) domain 1 220 437 - -
Acco02g0167 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Acco02g0167 444 FunFam Receptor-like serine/threonine-protein kinase ALE2 220 436 - -
Acco02g0167 444 CDD STKc_IRAK 153 420 - -
Acco02g0167 444 MobiDBLite consensus disorder prediction 424 444 - -
Acco02g0167 444 SUPERFAMILY Protein kinase-like (PK-like) 125 417 IPR011009 -
Acco02g0167 444 FunFam Serine/threonine-protein kinase PBS1 112 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0167 Acco-ChrAcco02 1272677 1275347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0167 108 442 Receptor kinase-like Gene Family AT3G58690 61.696 2.22e-150 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Acco02g0167 PK_Tyr_Ser-Thr 1.2e-42 CL0016