Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0165 ATGATTCATGTGAAGCACTGCCCTCAATTCCCCGCCATGAGTATGACCAAGCTCATCTCTCCTCATCATGGAGCCTTTCTCTGCCTCACCCTCCTCTTCCCCCTCCTCGTCGCTGCTCAACCATCTTCCAATTCTAACAACGACCCAACCCAACAACAGCTCAATAGCCTCACCCCTTCCATGGCCATCATCATCGTCATCCTGGTTGCCGCTCTTTTCTTCATGGGCTTCTTCTCCATCTACATCCGCCAGTGCGCCGACTCCCCCTCCGGCAGCGTCCGTCCCCTTGGCCTCCGTGCTTCCATCGGCCGTTCCCGGCGTGCTCCTCGCGGTCTTGACCCTCTCGTCATCCACACCTTCCCCACTCTTCACTATTCCGAGGTCAAGTCCCACAAGATCGGTAAAGGCGCCCTCGAGTGCGCCGTCTGCTTGTCTGAGTTCGAAGATTCCGAAACGCTGCGTTTGCTCCCCAAGTGCGATCACGTCTTCCACCCTGAGTGCATCGACGAGTGGTTGGCTACTCATACCACCTGCCCCGTCTGCCGAAATGACCTCGTTCCTCAGCCTGACCAGTCAGTACTCGGAGTTCCGATCGTCAACGCCGACGCCATGGACCTGGAAGCTCAGAACGGGGTCGTGGAGCCCGAACCCGAGCAGCAGCATTCTGTGGAGGCCGATCCTGAGTCGGCGGAGTCCGAAGTTGTGTGCCTCAATCCGACGATGAAACGGAACCGCACAACGCGAGGGTCTCGATCGGGTCGGGCGCGGAGGTTTCCCCGGTCGCACTCGACCGGGCATTCCTTGGTCCAGCCGGGTGAAGACACGGAACGTTTCACTCTGAGATTGCCCGTGGAAGTGAGGAATCAGATATTGAACCGGGAGTTGCATCGGGCGACAAGCCTGGTCGTCTTGCCCGGAGAAGCTAGTTCGAGACGAGGATATCGAGTTAGTGGGGATGGCAGTAGCAGAGGGAGGCACTCGAGGCGGCTGGATCGTAGTATTAAATCGGACCGATGGGTTTTCACGATGGCGCCGCCGTTTCTTGTGAGGGCGTCATCTATGAGGTCGCCGAAATTGGGAGGGAGCGTCCGTGAAGGAGTCTCCGCTCAAATCGTCGCGCCGGCGGCAGCGGATGCGGCCCAGCCTCCAGTTTAA 1155 0.5879 MIHVKHCPQFPAMSMTKLISPHHGAFLCLTLLFPLLVAAQPSSNSNNDPTQQQLNSLTPSMAIIIVILVAALFFMGFFSIYIRQCADSPSGSVRPLGLRASIGRSRRAPRGLDPLVIHTFPTLHYSEVKSHKIGKGALECAVCLSEFEDSETLRLLPKCDHVFHPECIDEWLATHTTCPVCRNDLVPQPDQSVLGVPIVNADAMDLEAQNGVVEPEPEQQHSVEADPESAESEVVCLNPTMKRNRTTRGSRSGRARRFPRSHSTGHSLVQPGEDTERFTLRLPVEVRNQILNRELHRATSLVVLPGEASSRRGYRVSGDGSSRGRHSRRLDRSIKSDRWVFTMAPPFLVRASSMRSPKLGGSVREGVSAQIVAPAAADAAQPPV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0165 384 PANTHER RING FINGER DOMAIN-CONTAINING 43 191 - -
Acco02g0165 384 MobiDBLite consensus disorder prediction 213 274 - -
Acco02g0165 384 SUPERFAMILY RING/U-box 139 189 - -
Acco02g0165 384 FunFam E3 ubiquitin-protein ligase ATL6 100 188 - -
Acco02g0165 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 187 IPR013083 -
Acco02g0165 384 CDD RING-H2_EL5-like 139 182 - -
Acco02g0165 384 SMART ring_2 140 181 IPR001841 -
Acco02g0165 384 MobiDBLite consensus disorder prediction 247 261 - -
Acco02g0165 384 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
Acco02g0165 384 Pfam Ring finger domain 139 182 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0165 Acco-ChrAcco02 1265783 1266937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0165 20 364 Rapid Response to Elicitors AT3G05200 47.091 2.36e-89 273