Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0164 ATGGTCCTGGAGGCTGTGGTTTTCCCCTCCCTCGACCCTCTCTCTCATCTTACCCTCAAAGACACTAATCTCTTCCCTTTCAACTCCTCCTTCTTCGACGACCCTCTTCTCCAAAACAACAGTCATCTTTCTGCTGATCGTTGGGATTGTGTCAATGATGTTCCTCTCTCCCACCCTTCCTCCTCCGACACCGCCGTTTCCCTTCCTCCTCCTCCTCTGGTTGCCGCTCGTCCCAAGAGGCGCCGCCCCAAAACCCGAAAGAATCAGCAAGAAATTGAGAATCAGAGAATGACTCACATTGCCGTCGAGCGCAACCGAAGGAAACAGATGAACGACTATCTCTCTGTTCTCCGCTCTCTCATGCCTGACTCCTACCTCCAAAGGGGTGATCAGGCTTCTATAATTGGAGGAGCTATTAACTTTGTCAAGGAGCTGGAGCACAGGCTCCAATTTCTGGGTTCTCAGAAACAAACAGAGGCCACATCATGGGAATCATGCCCTTCTGCAAAGTTACCTTTCTCTGAGTTCTTCACGTTTCCTCAGTACTCAACTAGTGCGAATTGTATTACTGGTGGGGGCGACAATAATAATTCAGGGTATGTGGGAGAGGGATCAGTGGGAGAGGCGATTCAGTCAGGGATTGCTGATATAGAAGTGACGGTTGTGGAGAGCCATGCAAATCTCAAAATAAGATCCAAGAAGCGACCCAAGCAGCTCTTGAAATTAGTCTCCGGCTTGCATTCCATGCGTCTCACCATCTTGCACCTGAACGTCACAACCACCGCCCAAATTGTCCTCTACTGTCTCAGTGTTAAGGTAGAAGATGATTGCAAGCTGGGTTCAGTGGATGATATAGCGGCAGCTTTATATCAAATGATGGACAGCATTCATCAGGAGTCACTGTTGTGCTAA 912 0.489 MVLEAVVFPSLDPLSHLTLKDTNLFPFNSSFFDDPLLQNNSHLSADRWDCVNDVPLSHPSSSDTAVSLPPPPLVAARPKRRRPKTRKNQQEIENQRMTHIAVERNRRKQMNDYLSVLRSLMPDSYLQRGDQASIIGGAINFVKELEHRLQFLGSQKQTEATSWESCPSAKLPFSEFFTFPQYSTSANCITGGGDNNNSGYVGEGSVGEAIQSGIADIEVTVVESHANLKIRSKKRPKQLLKLVSGLHSMRLTILHLNVTTTAQIVLYCLSVKVEDDCKLGSVDDIAAALYQMMDSIHQESLLC 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0164 303 SMART finulus 100 151 IPR011598 GO:0046983
Acco02g0164 303 Gene3D - 84 160 IPR036638 GO:0046983
Acco02g0164 303 PANTHER MAX DIMERIZATION, MAD 61 299 - -
Acco02g0164 303 CDD bHLH_AtFAMA_like 97 168 - -
Acco02g0164 303 MobiDBLite consensus disorder prediction 59 93 - -
Acco02g0164 303 Pfam Helix-loop-helix DNA-binding domain 95 146 IPR011598 GO:0046983
Acco02g0164 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 94 145 IPR011598 GO:0046983
Acco02g0164 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 94 160 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0164 Acco-ChrAcco02 1243597 1244680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0164 1 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 46.875 4.56e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco02g0164 HLH 3.3e-10 No_clan