Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0155 ATGGCTGACACGTTACCTCGTGAAAACTCGCTTTTTGCGGAGGCTTCCTTCAAATATAGGAGGAGGAGAAGACGCAGCCCAGGCATTGTGTTAGCTTTCATGGTGAATGGCGGTGACATGGCCTCCCATAATGTTGGTTGCTTATATAACAGTAAAATGGATTCCGTCAACAACACAAGGACAGTCCCAGCGAATGATGATTCTTTAGTCAGACATGAAAAACGAAGCTTTCTGTCTCGTTCCTCCACTTCTGCCCAAGACTTGAGGCATTTTGAACTGGAGAAAGAGAAAGAAGACGTTTCATCTCCTAGAGGAGTGTTAGAGGTCTGCTATCGTGACTTTGATTCTTCTCTACAATCATCCGAAATGGAGAATCGTTGTTCAATGTCCAACAGGGCACAAATTAGTTGGAGCAAATATTTTAAAAATTTGAAAAAGAGATCAATGAAGCGTCTAGCCACCTTTCCTTTTCATGCTGCGCCAACGGTACCAAAAGGGAAAAGCAAAAGCAGTAGAGAAAATCCTGTTTTGACTAATAATGCATATAAGTTCAGATCTTCATTGGCGAACTTCACACTCTCTGATTTGAGAAATGCAACCAACCATTTTAGTAATGAAAAATTGATTGGAAGAGGTGGCTATTCTGAAGTTTACTGGGGTCGTCTCAAAGATGGTAGTCTTGTAGCTATCAAGAGACTAACTAAAGGGACTCCAGATGAGAGAACTGCAAGCTTTCTATCTGAGCTGGGCATTATTGCTCATGTTGACCATCCCAATATTGCAAAGCTTATTGGATGTGATGTAGGAGGAATGCACCTTGTCTTCCAACTTTCCCCGCTCGGAAGCTTAGGATCTCTCCTTCATGGTCCAAGTAAAAACAAGTTAGATTGGAGTAAAAGGTATAAGATTGCTCTGGGCATAGCCAATGGCCTTCTTTACCTTCATGAGTGCTGTCACAGGCGAATCATTCATAGAGATATTAAGTCAGATAATATCCTGCTCACTGAAAGCTTTGAGCCACAGATTTGTGATTTTGGGATGGCAAAATGGTTACCCAGACAATTGAGCCACCACAACGTATCGAAGTTTGAAGGCACATTTGGGTATTTTGCTCCTGAATACTTCATGCATGGCATAGTGGACGAGAAAACTGATGTTTATTCTTTTGGGGTTATACTGTTGGAGCTTATAACTGGGCGTCCAGCTGTGGATGAAAATCAGCTTAGTGTTGTACTATGGGCAAAGCCTTTGCTTGATGATGATAATATGAAGGACCTTGTTGATCCTTGTCTTGGGAACGACTTTGACAGAGAACAGATGGATCGGGTTGTTCTGACAGCATCTCTGTGCGTGGAGCACTCAGCTGTCTTACGTCCCTTCATGAGTCAGGCAAGTACACAACCTAGAAAGTTGAATTTCTGCAACTGCTTTCAGATCCTGTACAATGGACATTGTCATGAACTCATCTGGAAGATTCATTTAGCTGCGATGCTGCTAAGGAATGATGACTATGCAAGGGAACCTACAAATGCAAGCCGGAGGCGGTCTTTCCTTAGAACATACTCACAAGAACTTCTGGATGCACAAGAATACAACTCAACCAAGTATCTAAATGATCTCAATCAATACAAGAAGATTGCCCTAGGATCTTGA 1653 0.4229 MADTLPRENSLFAEASFKYRRRRRRSPGIVLAFMVNGGDMASHNVGCLYNSKMDSVNNTRTVPANDDSLVRHEKRSFLSRSSTSAQDLRHFELEKEKEDVSSPRGVLEVCYRDFDSSLQSSEMENRCSMSNRAQISWSKYFKNLKKRSMKRLATFPFHAAPTVPKGKSKSSRENPVLTNNAYKFRSSLANFTLSDLRNATNHFSNEKLIGRGGYSEVYWGRLKDGSLVAIKRLTKGTPDERTASFLSELGIIAHVDHPNIAKLIGCDVGGMHLVFQLSPLGSLGSLLHGPSKNKLDWSKRYKIALGIANGLLYLHECCHRRIIHRDIKSDNILLTESFEPQICDFGMAKWLPRQLSHHNVSKFEGTFGYFAPEYFMHGIVDEKTDVYSFGVILLELITGRPAVDENQLSVVLWAKPLLDDDNMKDLVDPCLGNDFDREQMDRVVLTASLCVEHSAVLRPFMSQASTQPRKLNFCNCFQILYNGHCHELIWKIHLAAMLLRNDDYAREPTNASRRRSFLRTYSQELLDAQEYNSTKYLNDLNQYKKIALGS 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0155 550 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 279 470 - -
Acco02g0155 550 SMART serkin_6 203 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0155 550 ProSiteProfiles Protein kinase domain profile. 203 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0155 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 322 334 IPR008271 GO:0004672|GO:0006468
Acco02g0155 550 SUPERFAMILY Protein kinase-like (PK-like) 187 478 IPR011009 -
Acco02g0155 550 Gene3D Phosphorylase Kinase; domain 1 176 276 - -
Acco02g0155 550 PANTHER OS08G0249100 PROTEIN 79 464 IPR046958 -
Acco02g0155 550 Pfam Protein kinase domain 204 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0155 550 ProSitePatterns Protein kinases ATP-binding region signature. 209 231 IPR017441 GO:0005524
Acco02g0155 550 Gene3D Transferase(Phosphotransferase) domain 1 279 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0155 Acco-ChrAcco02 1186846 1190337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0155 164 463 Trihelix Transcription Factor Family AT5G38560 43.269 1.59e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Acco02g0155 Pkinase 9.8e-40 CL0016