Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0139 ATGGGGTGTGTGATTAGTCGAGAAGTGTCATCGGGAATAATCTCTGAGGTGAAAGAGGAGAAGAATTTAAGTGGCGAGTCGAGGAGGAAGGTAGATGAAACGTCGTCTCAGAGCGTGGTAGAGGCTCAGAACGGTGGGAAGCAAAAGGAAGAGAAGGGTGGTGGTGATGAAGGGATCCAGGCCCAACGGCCGAGGGGCGAAAGGAGGAGATCAAAGCCAAACCCAAGGCTAAGTAATCCTCCCAAACATGTGCGAGGAGAGCAAGTAGCAGCTGGATGGCCGCCCTGGCTTACGGCTGTTTGCGGTGAAGCGCTTAGCGGATGGATTCCCCGAAAGGCTGACACGTTTGAGAAAATTGAGAAGATTGGCCAAGGAACGTATAGCAATGTGTACAAGGCTAAAGATATGTTGACGGGTAAGATTGTTGCTCTTAAGAAAGTTCGGTTCGACAATTTGGAGCCTGAGAGTGTAAAGTTCATGGCTAGAGAAATTCTAATTCTCAGAAGATTGGATCACCCCAATGTTGTAAAGTTGGAAGGCTTAGTTACATCAAGGATGTCATGTAGTCTGTATCTGGTATTTGATTACATGGTGCATGATTTGGCTGGACTTTCTGCAAGCCCAGGAATCAAGTTCACAGAGCCTCAGATCAAATGTTACATGCATCAACTACTCTCTGGACTTGAGCATTGTCATAAACGGCACATACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACGATGGGGGAGTACTTAAGATTGCTGACTTCGGACTGGCTTCTTTCTTTGATCCAAACCACAAACACCCCATGACTAGTCGTGTGGTTACACTTTGGTATCGACCTCTTGAGTTGCTTCTTGGTGCCACGGATTATGGTGTGGGTATTGATCTTTGGAGTGCAGGTTGTATTTTAGGGGAGTTATTGGCTGGGAAGCCAATTATGCCTGGTCGTACAGAGGTAGAGCAACTGCATAAGATATACAAACTATGCGGCTCACCTTCTGATGAGTATTGGAAGAAGTCAAAGTTGCCTCATGCTACCTTATTTAAACCTCGAGAGCCATACAAGAGATGCATAAGAGAGACGTTTAAAGATTTTCCACCTTCTGCACTGCCCCTTATCGACACGCTCCTTGCCATTGATCCAGCAGAAAGGAAGACAGCTTCGAATGCATTAAATAGTGAGTTCTTCACAACAGAACCATTTGCTTGTGAACCTTCTAATCTTCCCAAATATCCCCCAAGCAAGGAAATGGATGCTAAACGGCGGGATGATGAAGCAAGGAGATTAAGAGCTGCAGGCAAAGCTCATGTTGATGGTACAAAGAAAACCCGAGCACGTGAACGTGGTGCTAAAGCTTTTCCTGCCCCTGAAGCCAATGCTGAGCTTCAGTCTAATATTGATAGAAGGCGGCTAATCAGTCACGCTAATGCCAAGAGCAAGAGTGAAAAGTTTCCTCCGCCACATCAAGATGGGCAACTTGGATATCCTTTGGGAGCTTCGAATCATATAGATCCTGACATTGTTCCTTCTGATGTCGCCTTCAGTTCAACTTCATTTACTTACTCAAAAGAACCGTTCCAAGCTTGGTCAGGTCCCATAGGTAATACTGCTGCCATTGATGCACCAAAGAAGAAGAAGAAACTCACAGCAGCAGATACATTGGATTTATCAAAACCACACACAGTTTACACCAAAGATAAGGTTAAAGGAAAGAAAATCAAAGCCTAG 1740 0.4506 MGCVISREVSSGIISEVKEEKNLSGESRRKVDETSSQSVVEAQNGGKQKEEKGGGDEGIQAQRPRGERRRSKPNPRLSNPPKHVRGEQVAAGWPPWLTAVCGEALSGWIPRKADTFEKIEKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFDYMVHDLAGLSASPGIKFTEPQIKCYMHQLLSGLEHCHKRHILHRDIKGSNLLIDDGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPLELLLGATDYGVGIDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPHATLFKPREPYKRCIRETFKDFPPSALPLIDTLLAIDPAERKTASNALNSEFFTTEPFACEPSNLPKYPPSKEMDAKRRDDEARRLRAAGKAHVDGTKKTRARERGAKAFPAPEANAELQSNIDRRRLISHANAKSKSEKFPPPHQDGQLGYPLGASNHIDPDIVPSDVAFSSTSFTYSKEPFQAWSGPIGNTAAIDAPKKKKKLTAADTLDLSKPHTVYTKDKVKGKKIKA 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0139 579 Gene3D Transferase(Phosphotransferase) domain 1 199 439 - -
Acco02g0139 579 SUPERFAMILY Protein kinase-like (PK-like) 111 405 IPR011009 -
Acco02g0139 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Acco02g0139 579 CDD STKc_CDK9_like 116 400 - -
Acco02g0139 579 MobiDBLite consensus disorder prediction 418 455 - -
Acco02g0139 579 ProSiteProfiles Protein kinase domain profile. 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0139 579 MobiDBLite consensus disorder prediction 410 473 - -
Acco02g0139 579 PANTHER CELL DIVISION PROTEIN KINASE 114 404 - -
Acco02g0139 579 MobiDBLite consensus disorder prediction 18 35 - -
Acco02g0139 579 MobiDBLite consensus disorder prediction 18 88 - -
Acco02g0139 579 MobiDBLite consensus disorder prediction 45 74 - -
Acco02g0139 579 SMART serkin_6 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0139 579 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Acco02g0139 579 Pfam Protein kinase domain 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0139 579 FunFam probable serine/threonine-protein kinase At1g54610 199 440 - -
Acco02g0139 579 FunFam probable serine/threonine-protein kinase At1g54610 103 198 - -
Acco02g0139 579 Gene3D Phosphorylase Kinase; domain 1 103 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0139 Acco-ChrAcco02 1067643 1071518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0139 108 438 Core Cell Cycle Gene Families AT5G10270 51.297 5.29e-118 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Acco02g0139 Pkinase 2.2e-64 CL0016