Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0128 ATGCTTATCATTATCAGGGGAAGCTTGTACAGAATTCTTCATCGTCCTAATGGTCAGATTGATGAGAAACGCAGAATTAAAATGGCTCTGGACGCGGTAAGGGGCATGAATTGCTTACACACCAGCACACCTACAATTGTTCACCGTGATCTGAAGTCACCAAATCTTTTGGTTGATAACAACTGTAATGTTAAGCACAACACATTTTTATCATCCAAGTCAACTGCTGGAACGGCGATGTGA 243 0.4156 MLIIIRGSLYRILHRPNGQIDEKRRIKMALDAVRGMNCLHTSTPTIVHRDLKSPNLLVDNNCNVKHNTFLSSKSTAGTAM 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0128 80 Gene3D Transferase(Phosphotransferase) domain 1 1 79 - -
Acco02g0128 80 Pfam Protein kinase domain 7 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0128 80 ProSiteProfiles Protein kinase domain profile. 1 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0128 80 SUPERFAMILY Protein kinase-like (PK-like) 6 65 IPR011009 -
Acco02g0128 80 PANTHER SERINE-THREONINE PROTEIN KINASE 6 79 - -
Acco02g0128 80 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0128 Acco-ChrAcco02 999484 1003036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0128 6 78 MAP Kinase Kinase Kinase AT1G08720 77.108 1.27e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Acco02g0128 Pkinase 6.4e-09 CL0016