Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0121 ATGTTATGTAGGAGCCCCCACGCTAACCATACTCAAATCTCCCCTCCTCTCTCCCCCATGGCATCCCTTCAACACGACACCGTTTTGCCCGAAGAGGACCTTGACGACGACGATGACGAATCTCAAGAGGACGAAGACGAGGACGAGGATGAGGACGTGCTTGGTCCTGAGGACGATGAGGATCGTGATGCTTCTCCTTCCACCTCTTCTGCCCTCCCCGTCCCTTCCTCCACCGTCACTGTTGCCGTACCCGGCTCTGCTGTCTCCAACGGCGCTCCTGCCCCGATTTCCATGACTGCCTCCACCACAATCGTCCTCCCCGACACCGTCGATCCCAAGCGTCAGCGAATTGACTCTGGCGAAGAGAAAAAGCCTCTGGACGATTCACGCAGACTTTTTCAACGCCTTTGGACCGATGAGGACGAGATCGAACTCTTGCAGGGCTTCCTTGACTACACCACACAGCGAGGATCCTCCCACCACAATGATACCGCCTTGTTTTATGACCAAATCAAGTCCAAGCTTCAGATCGACTTCAACAAAAACCAGCTTGTTGAGAAGCTCCGCAGGTTGAAGAAGAAATACCGCAATCTTTTGAATAAGATTAGCGCTGGCAAAGAATTGTCGTTTAAGAGCCCTCACGATCAAGCCACCTTCGAAATTTCTCGTAAGATCTGGAGCAATTTGGGTTCAACTGGCGCTGCTGCCGAAGATACCGCCTTGGATGACGACGAAATCAGCCCCAACCCTAACCCTAACCCTAATTTTGGCCACTTGCAGCCTAAGAATGAGGTAATAATCGGGACTCCTGCGGAGAAGAGGACGCCATCGTCCCGGAAGCGTTCACGGTCTCGATCTCGGATCACAGCCGATGAGAAACGCGACTTGAATGATGGATTGGCTTCAAACAAAGATAATTATTGTATTAGTAATAGTAATGCTAATACTAATAATAATCATAACAACAACCATAACATACCAGGTTTGATCGAGGAGACGGTGAGGAGTTGTCTGTCGCCCTTGTTCAAGGATATACTGAGCAGTGCCATGGGTGGCCCAATTGGGGCCAGGGGTTTTGGAGGATTGGCATTAAATCCTATGCCATTGAGCTTCAGTGTGCCGTCCTTGATGAATTACAGCAGCGGAGAAACGGTAGATGAGAAGTGGAGGAAGCAACAGATTCTGGAGTTGGAGGTGTACTCGAAGCGGCTGGAGTTGGTGCAGGATCAGATCAAGGCTGCATTGGAGGAGTTGCGATCCACTGGACGATGA 1272 0.5079 MLCRSPHANHTQISPPLSPMASLQHDTVLPEEDLDDDDDESQEDEDEDEDEDVLGPEDDEDRDASPSTSSALPVPSSTVTVAVPGSAVSNGAPAPISMTASTTIVLPDTVDPKRQRIDSGEEKKPLDDSRRLFQRLWTDEDEIELLQGFLDYTTQRGSSHHNDTALFYDQIKSKLQIDFNKNQLVEKLRRLKKKYRNLLNKISAGKELSFKSPHDQATFEISRKIWSNLGSTGAAAEDTALDDDEISPNPNPNPNFGHLQPKNEVIIGTPAEKRTPSSRKRSRSRSRITADEKRDLNDGLASNKDNYCISNSNANTNNNHNNNHNIPGLIEETVRSCLSPLFKDILSSAMGGPIGARGFGGLALNPMPLSFSVPSLMNYSSGETVDEKWRKQQILELEVYSKRLELVQDQIKAALEELRSTGR 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0121 423 Coils Coil 181 208 - -
Acco02g0121 423 MobiDBLite consensus disorder prediction 284 300 - -
Acco02g0121 423 MobiDBLite consensus disorder prediction 30 59 - -
Acco02g0121 423 MobiDBLite consensus disorder prediction 7 21 - -
Acco02g0121 423 Coils Coil 397 423 - -
Acco02g0121 423 PANTHER BNAANNG10740D PROTEIN-RELATED 20 417 IPR007592 GO:0006355
Acco02g0121 423 Pfam Protein of unknown function, DUF573 133 227 IPR007592 GO:0006355
Acco02g0121 423 MobiDBLite consensus disorder prediction 1 77 - -
Acco02g0121 423 MobiDBLite consensus disorder prediction 241 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0121 Acco-ChrAcco02 956136 958695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0121 20 420 GeBP Transcription Factor Family AT5G28040 44.045 2.08e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Acco02g0121 DUF573 1e-34 CL0123