Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0117 ATGAATGGTGTCACTCACCTTGAACCGGATTTCCCTTCTGAGTTCGTCGAAGTTGATCCTACCGGCAGATACGGCAGATACAATGAAGTCCTCGGCAAAGGAGCTTCAAAGATAGTATATAGAGCATTTGATGAGTATCAAGGGATTGAAGTTGCGTGGAATCAAGTCAAGCTCTATGATTTCCTGCAAAGCCCTGAAGACCTTGAGAGGCTCTACTGTGAAATTCATCTTCTCAAAACACTGAAGCACAAAAACATAATGAAGTTTTACACTTCTTGGGTTGACACTGCCAACAGAAATATCAACTTCGTCACCGAAATGTTTACTTCTGGTACTCTCAGACAGTATAGGCTAAAGCACAAGAGAGTAAACATCAGAGCTGTGAAGCACTGGTGCAGACAGATATTAAAAGGACTTCTGTATCTTCATAGCCTCGACCCACCTGTGATCCACAGAGATCTCAAATGCGACAACATTTTTATTAATGGAAACCAAGGCGAAGTAAAGATTGGGGATCTTGGCCTGGCAGCAATTCTCAAAAAATCACATGCTGCTCATTGCGTCGGAACGCCTGAGTTTATGGCCCCAGAAGTATATGAAGAGGCATATAATGAATTAGTTGACATATATTCCTTTGGAATGTGCTTATTAGAGATGGTGACATTTGAATATCCTTATAGTGAATGCACTCATCCAGCTCAAATATACAAGAAAGTTATATCTGGGAAAAAGCCAGATGCTTTGTACAAAGTTAAAGATCCAGCAGTGCGACAATTTGTTGAGAAATGCCTGGCAACAGTGTCTTTAAGGCTCTCAGCAAGGGAGCTTCTTGATGACCCGTTTCTCCAAATTGATGATAACTTTTATAATTTGACACTAGTAGACAGTGGAGAATTTGATGACTTGGGTCCTTTTGTCGGGCATCCATTCTTAGATCTTTGCCGAAGTAATAGCAACTTAAGTAGTGAATATTCAAATTATTATGGATATGACGCTCCAGGATACTGGTACTCCCATCCAGTTGACACTGAACCAGGTGGAATTGAACTTTTTGAGCACCGTGATGATGATCCATCCGAAGATGTTGACATAAGCATCGAAGGCAAGAGGAAAGATGGTGGCATCTTTTTGAGACTAAGAATTGCAGATAGAGAAGGTCGTATCCGAAACATTCATTTCCTATTTGACGTAGAGATGGACACAGCACTAAGTGTGGCGACTGAAATGGTTGCAGAACTTGATATTACTGATCAAGATGTGACCAGAATAGCAGATATGATAGATGGGGAAATTTCTTCCTTGGTACCTGAATGGAGGCCAGGACCAGGGATTGAGGAAACTCCTCGATTCGCAAATGAAAAGCTCTGTGACAATTGTGCATCAAATCATAGATCAAGCGGCTCCTTTATGGACTTTCGCCCACATGATACAGGTGCCAGGGACTCGCAACTTCTTCCATGCTGTAGGCATGGATGTGCTTCAATGCATGGGCGATTTGAGGAGATTATGTTCCAATCTGAGTATGGAGAAGATCATGCTAGGGATGATGCTGCAAACACATTGAAGTATCCTAAGTTGTGGAAACAACAAGAGAGTCGTGAGATCACTCCTGTAGATTCTGAACATAGCCATTCTGACGAACAAAATGAACCAGTAGACAAGCAAGCACCAGCAGAAGACAAGGAACGGGGTGTTAGGGAAAATAAAGTTGTACCCAACTCAAGGAATTGCCTATCAAATCTATCAGTATTCCATTACTTATCTACAATACGCTCACTATATGTTGACCCTGATGACAAGTGTGGGAAAGATATCCAACAGGAGCTTAGATGGCTCAGAGCAACGTATCAAATCGAGTTAAGAGAACTTAGAGATCGACAATTTGGGATGACAACAAGTAACAGACAGCACAACAAAGAATGCGGCGTCATGTCATTGCCCCTTTCAACGGGAGACACATCAACCAGGGGCAATAACCTTGGGATTCACTTAAAATCCTTCACTAACAGTTGGAGTTGTGGTTCTAGTTGCCATTCTCTTGTCGATCCGAGCCGGCCCAATTTGGACGCTCAAAGGGCCCGAGCTTGTGAGGCGATGGGTTTCACTGGTGAAGAAGGTGTGGTTAGTACAAAGAGTTTGTGTGCAGGAACATTGCTTCCTCCCTGTCTACGCAGGACAGTTTCCCTCCCAGTCGATGCTGTTGATATATAA 2211 0.4279 MNGVTHLEPDFPSEFVEVDPTGRYGRYNEVLGKGASKIVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILKGLLYLHSLDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILKKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCLLEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPAVRQFVEKCLATVSLRLSARELLDDPFLQIDDNFYNLTLVDSGEFDDLGPFVGHPFLDLCRSNSNLSSEYSNYYGYDAPGYWYSHPVDTEPGGIELFEHRDDDPSEDVDISIEGKRKDGGIFLRLRIADREGRIRNIHFLFDVEMDTALSVATEMVAELDITDQDVTRIADMIDGEISSLVPEWRPGPGIEETPRFANEKLCDNCASNHRSSGSFMDFRPHDTGARDSQLLPCCRHGCASMHGRFEEIMFQSEYGEDHARDDAANTLKYPKLWKQQESREITPVDSEHSHSDEQNEPVDKQAPAEDKERGVRENKVVPNSRNCLSNLSVFHYLSTIRSLYVDPDDKCGKDIQQELRWLRATYQIELRELRDRQFGMTTSNRQHNKECGVMSLPLSTGDTSTRGNNLGIHLKSFTNSWSCGSSCHSLVDPSRPNLDAQRARACEAMGFTGEEGVVSTKSLCAGTLLPPCLRRTVSLPVDAVDI 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0117 736 Gene3D Transferase(Phosphotransferase) domain 1 108 288 - -
Acco02g0117 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Acco02g0117 736 FunFam probable serine/threonine-protein kinase WNK9 108 287 - -
Acco02g0117 736 CDD STKc_WNK 23 282 - -
Acco02g0117 736 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 376 429 IPR024678 GO:0004674|GO:0005524
Acco02g0117 736 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0117 736 SMART serkin_6 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0117 736 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 632 - -
Acco02g0117 736 FunFam Probable serine/threonine-protein kinase WNK1 10 106 - -
Acco02g0117 736 SUPERFAMILY Protein kinase-like (PK-like) 28 283 IPR011009 -
Acco02g0117 736 Gene3D Phosphorylase Kinase; domain 1 10 106 - -
Acco02g0117 736 MobiDBLite consensus disorder prediction 530 568 - -
Acco02g0117 736 Gene3D - 373 439 - -
Acco02g0117 736 ProSiteProfiles Protein kinase domain profile. 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0117 Acco-ChrAcco02 932946 935910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0117 1 542 MAP Kinase Kinase Kinase AT3G22420 53.445 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Acco02g0117 Pkinase 5.1e-48 CL0016