Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0111 ATGGGGAAGGCAAGCAGGTGGATCAGAAACTTACTGATAGGGAAGAAAGAAGAGAAGTACAAGCAGATTGATGGAGGAGGGAGTGAGACTGAGACCCAAAGCCCCAAAGTGAAGCGTAGATGGAGCTTTGGGAAAAAATCAGTGAAGGTAACAAACCATAGACTGAGCTCATCATCTTTTGATATAACTGACTCTGCTAAGCTCCAAATAAGGGCCATCCTCCAATCTCTTCCCCTGCCTTATTATCACATCCAAAACGCCGCTGCCACTAAGATTCAGGCTGCTTTTCGCGCTTATTTGGGAAGAAAGGCATTGCGTGCTCTGAGGGGACTGGTCAAGTTGCAGGCTTTAGTGAGAGGTCACCTTGTAAGGAAGCAAACAACCACCGCGCTGCGCGGCATGCACGCCTTGATGACCATTCAAGTCAGAGCCCGAATCCACAGAATTCTGATGGCTCAACAATTGCAGAACGAGAATTCACAACTTCAAGAATTAAACCATATGAATATGAGAGAATCGTTAGGAGTTACAAGAAGCAGAAGTGCCCGTTTTGATGGTCCATATCGTAAGAGCGCAGAGCATGATTCCAGGACTCTGAGTTCAAAGCATGTTTCTGATCTTTGGGTGTCGAAGAGACGCCATCAATACTCAGCACCAAACAGCCCGGCAGACTCCTTTTCCATGTCTGGATTAAATCCAACAGAGGGCTTGTCCACTTCTCTGCGACATCACCAATCATATTCATGCGAACCAAACTACATGACAAGAACAGAGTCATCACGGGCCAAAGCTCGGTCTGAGAGTGAACCAAAACAACGACCCAAACGTGAGATCAGGCACATCAACAATAACCAGCCTATAGAACCATTGGATGGTCGAAAGCAACGCTCATTCTTGGTACATAACAAGGCGAGAAATTCACTTTGA 927 0.4639 MGKASRWIRNLLIGKKEEKYKQIDGGGSETETQSPKVKRRWSFGKKSVKVTNHRLSSSSFDITDSAKLQIRAILQSLPLPYYHIQNAAATKIQAAFRAYLGRKALRALRGLVKLQALVRGHLVRKQTTTALRGMHALMTIQVRARIHRILMAQQLQNENSQLQELNHMNMRESLGVTRSRSARFDGPYRKSAEHDSRTLSSKHVSDLWVSKRRHQYSAPNSPADSFSMSGLNPTEGLSTSLRHHQSYSCEPNYMTRTESSRAKARSESEPKQRPKREIRHINNNQPIEPLDGRKQRSFLVHNKARNSL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0111 308 ProSiteProfiles IQ motif profile. 109 136 IPR000048 GO:0005515
Acco02g0111 308 MobiDBLite consensus disorder prediction 183 210 - -
Acco02g0111 308 ProSiteProfiles IQ motif profile. 85 113 IPR000048 GO:0005515
Acco02g0111 308 Coils Coil 152 172 - -
Acco02g0111 308 PANTHER IQ-DOMAIN 5-RELATED 1 286 - -
Acco02g0111 308 SMART iq_5 107 128 IPR000048 GO:0005515
Acco02g0111 308 SMART iq_5 84 106 IPR000048 GO:0005515
Acco02g0111 308 Pfam IQ calmodulin-binding motif 87 106 IPR000048 GO:0005515
Acco02g0111 308 Pfam IQ calmodulin-binding motif 112 126 IPR000048 GO:0005515
Acco02g0111 308 Gene3D - 84 136 - -
Acco02g0111 308 MobiDBLite consensus disorder prediction 214 259 - -
Acco02g0111 308 MobiDBLite consensus disorder prediction 174 308 - -
Acco02g0111 308 Pfam Protein of unknown function (DUF4005) 218 281 IPR025064 -
Acco02g0111 308 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 127 IPR027417 -
Acco02g0111 308 MobiDBLite consensus disorder prediction 260 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0111 Acco-ChrAcco02 895347 896435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0111 1 274 IQD Protein Family AT4G14750 35.762 3.78e-36 133