Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0102 ATGGATAGGGTGTTTTCAGTGGAGGAAATTTCTGAACATTTTTGGTTGTCGCCGGTATCCACCGTGAAGGATGAATCCTCCTCTGGGATGAATCGCAGTGCTTCCGAATGGGCCTTCCAACGATTTCTCCAAGAAGCTTCTGCAGCGTCCCATGACTCTCAAGCTTCTTCCTCCGATCATGACAAAAACGACGACTCTAGCCTTGAGATTAAGGAGCAGCCCAAACCCAAGCAGGAGCTCACGGCGCCATCCATTCCTAAGAATGCTGCTGTCTTCTCCAATGCACCTTCTCCTATCATCCCTGTTGATTCCGAGCAGTACCAGGCTATCCTCAAGAGCAAACTCAATCTCGCTTGCGCCGCGGTCGCCTTGACTCGGGGTTCTTTAGCCAACTCCCAAGATCCAGCCACTTTACCTAATGGCGTATCAAAGGCTAATAAAACTTCACAAGCTAGATCTCCGGCTACTTTAGAAGGACATGGTCCATCTAATGTACATGACAAAGATGCGGAAGGGCCAGTTGGAAATCCTTCATTACCTGCCGCTCAAAAGAAACTGGCAATTGCAACCAAGCCAACAACCAGTGGATCATCGAGGGATCAGTCTGATGATGAGGAAGCCGAAGGAGAGACTGATATGACTGAAAATATGGACCCTGCAGATGCAAAACGAGTTAGGAGGATGCTTTCTAATAGGGAGTCGGCCAGACGCTCGAGAAGAAGAAAGCAGGCTCATTTAACTGAGCTTGAAACACAGGTTGCACAATTAAAAGTAGAAAACTCATCATTGTCAAAGCGTCTTGCTGATGTAAGCCAAAAGTACAATGAAGCTGCTGTTGACAACAGGGTCTTGAAAGCTGATGTCGAAACATTAAGAGCAAAGGTAAAGATGGCCGAAGAGACTGTAAAAAGAATAACTGGGTCAAACCCAATGTTCAATGCGATGTCTGAGATATCATCGATGGGCCTGCCATCATATGACGGAAGCCCTTCCGACCCATCAGATGCAGCTGTACCTGTGCAAGATGACCGAAGTCATAACTTCTATCAACCCACTTCTAATAATTCTTTGTCCAAGCCCGAGTCAAAAGTCAACAATGGAATTGGAGAAATTTCTTCCATGGAAAATTTGCAGCAGATTCCCGTGGCTATGGTAACTGGAAACAAGATGGGGCGAACAGCTTCCCTGCAGCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATCCGCGGTGGTGCAGATTCTTGTGGTCCGCCTGGCAATGGAGAGCAGCAATAA 1278 0.4742 MDRVFSVEEISEHFWLSPVSTVKDESSSGMNRSASEWAFQRFLQEASAASHDSQASSSDHDKNDDSSLEIKEQPKPKQELTAPSIPKNAAVFSNAPSPIIPVDSEQYQAILKSKLNLACAAVALTRGSLANSQDPATLPNGVSKANKTSQARSPATLEGHGPSNVHDKDAEGPVGNPSLPAAQKKLAIATKPTTSGSSRDQSDDEEAEGETDMTENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLKVENSSLSKRLADVSQKYNEAAVDNRVLKADVETLRAKVKMAEETVKRITGSNPMFNAMSEISSMGLPSYDGSPSDPSDAAVPVQDDRSHNFYQPTSNNSLSKPESKVNNGIGEISSMENLQQIPVAMVTGNKMGRTASLQRVASLEHLQKRIRGGADSCGPPGNGEQQ 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0102 425 Coils Coil 232 273 - -
Acco02g0102 425 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 226 241 IPR004827 GO:0003700|GO:0006355
Acco02g0102 425 MobiDBLite consensus disorder prediction 129 157 - -
Acco02g0102 425 Pfam Basic leucine-zipper C terminal 290 413 IPR020983 -
Acco02g0102 425 PANTHER BASIC LEUCINE ZIPPER 63 1 413 - -
Acco02g0102 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 221 276 IPR004827 GO:0003700|GO:0006355
Acco02g0102 425 SMART brlzneu 219 283 IPR004827 GO:0003700|GO:0006355
Acco02g0102 425 Pfam bZIP transcription factor 222 274 IPR004827 GO:0003700|GO:0006355
Acco02g0102 425 FunFam BZIP transcription factor 221 272 - -
Acco02g0102 425 MobiDBLite consensus disorder prediction 55 76 - -
Acco02g0102 425 MobiDBLite consensus disorder prediction 345 366 - -
Acco02g0102 425 Coils Coil 281 301 - -
Acco02g0102 425 MobiDBLite consensus disorder prediction 129 223 - -
Acco02g0102 425 CDD bZIP_plant_GBF1 224 275 IPR045314 GO:0003700|GO:0006355
Acco02g0102 425 Gene3D - 222 278 - -
Acco02g0102 425 MobiDBLite consensus disorder prediction 324 366 - -
Acco02g0102 425 MobiDBLite consensus disorder prediction 46 98 - -
Acco02g0102 425 SUPERFAMILY Leucine zipper domain 223 273 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0102 Acco-ChrAcco02 847065 850422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0102 1 312 bZIP Transcription Factor Family AT4G02640 38.872 8.26e-46 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco02g0102 bZIP_C 4.3e-40 No_clan