Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0086 ATGCATAGCAAGGCAAGTGTGTTGCCGTGGCTCGTATGCATATGTGTCTTCCTGAAAACCCGTGAGGCATGGGCTAAGGGCGCCGGAGCGCCGTTGATCTTGGGTTGCGGGCTAGCCGACGTTGGCGGCAAAGATGCCGACGGAAGGCAATGGGAGGCCGATGCTAAGTATTTGTCGGGGGGTAATTCCAACACATTTAGAGCATCGTACCAAGACCCTTCGCTCATGTCTGAGATTCCATACATGCGGGCACGAGTTTTCACCTCAGAGGCAATTTATAAATTCCCAGTTCAACCTGACCAGCGTTATTGGCTTCGCCTTCACTTTTATCCCTCCGTTTATGGTTCTTATGATCCCAGCAACTCATATTTCTCCGTAACGGCCAACGAGGTTACGCTTTTGAGCAATTTCAGCGCTTCCATTACTTGTCAGGCATTGTCTCAAGCTTACATTATCAGAGAGTATTCCCTTGCCCCTTTGAACTCAGATATTCTCACGGTTACTTTTAAGCCATCAGACAAGTACGATCAAGCTTTTGCTTTTGCTAACGGGATCGAAGTGATTGAAATGCCAGATTTGTTTGATTCAGCCACACTAGTTGGGTTTTCCGAGCAAAGCGTCGATACCAAAAGCTTGAATTTGCAGACAATGTTTAGGCTCAATGTGGGTGGGCAATATATATCCCCACTCCAAGATTCTAATCTTACCAGGGCATGGTACGATGACACGCCTTATTTATATGGTGCATCAGTTGGTGTCACCAACGAAGCTGACGATAATGTCACTATCGACTACCAAACCATGCCACATTACATTGCCCCTCCCACTATCTACTCTACATCGAGATCCATGGGGAACGATAAGAACGTGAACATGGGATATAACCTCACCTGGACATTCCAAATTGATCCAAATTTCATGTACCTTGTGAGGTTTCACTTCTGTGACTACTATTATTATAGAGTGAACGAGATAGTTTTCGACATCTACTTGAACAATCAAACGGCACAGGCCGAAGCAGATGTAATAGCGTGGTCAGGGGGAAAAGGGGCGCCAACGTACAAAGATTATGTGGTGATTGTGCAAGATGGGCAGAGCAACGAGCAATTATGGATTGCTCTGCATCCATCGACCAAAACAAAGCCAGAGTACTATGATGCGATACTGAATGGGATAGAGATATTCAAGATCAATGACACATCCTTGGCTGGGCCAAATCCTCAGCCGTCAGATATGCTCATGAAGAGTGAGCAACAATCGCAGACATTTAACACAACAACCAAAGGAAGTCACAAAAAAACTGTTTTGTTAAGTGCGGGAGGAGCTGTGGGAGTTGCATTCTTAACTGCAATATGTATTGTTATGTATCAGAAGAAGAAGAGAGCGCCGGGATCAAATTCACACACATCATGGCTACCAATCTACGGGAATTCCCCTTCAAGTGGCAGCAAATCCACATTGTCGGGGAAAAGCAATGCAGGTAGCAACATATCAGCCATGGCTCAAGGTCTGTGTCGCCATTTTTCCCTGCAAGAGATCAAGCAAGCGACCAAGAATTTTGACGAGTCTAATGTTATTGGGGTTGGAGGGTTTGGGAAGGTTTACAAGGCTGTTATAGATAATGGGGTGAAAGTGGCCATCAAGAGGTCGAATCCACAGTCAGAACAAGGAGTAAATGAGTTCCAGACTGAAATTGAGATGCTTTCAAAGCTAAGACACAGGCATTTGGTATCCTTGATTGGGTTCTGTGAGGAGCAGAGTGAGATGTGTCTGGTTTATGACTACATGGCACGTGGCACCCTGAGAGAGCATCTCTACAAGGGCAATAAATCTCTGTCTACTTTGCCGTGGAAGCAGAGGTTGGAGATTTGCATTGGAGCCGCAAGAGGGCTTCACTACCTTCACACTGGGGCCCGATACACCATCATTCACAGAGATGTCAAGTCAACCAACATTCTACTGGATGAAAATTGGATCGCCAAGGTTTCGGATTTTGGGTTATCAAAAACAGGTCCGGAGCTGAAAAATGGGCATGTGAGCACGGTTGTGAAGGGAAGCTTTGGATATTTGGACCCTGAATATTTTAGAAGACAACAGTTGACTGAGAAGTCTGATGTCTATTCATTTGGGGTCGTCTTGTTCGAGGTTCTATGCGCGAGGCCTGTGTTGAATGCCAACCTTGCAAAGGAACAAGTGTCTCTTGCGGATTGGGCTCTGAGGTGCAAAAGAAACGGGACGCTGGAGGATATTATAGACCCATATCTGAAAGGAAAGATCAATCCAGAAAGTTTGAGGAAGTTCGCAGACACGGCAGAGAAGTGTTTGAGTGATCATGGGCTTGCCCGACCCTCAATGAGTGATCTGTGTTGGAATCTGGAACTCGCACTTAACCTCCAAGAAAACACAAAAGGGTCGAATAACCCTTCAAAAGGGGAGGAAAGTGACTTTCAGGAAGTGAGCTTGATAGACAACGAGGGAGGAAATAGTACAAGTGAGCATGACACAAGCCAAGATTCAGGCGATAGTTCATCGGCCATCTTCTCACAAATCATCAATCCTACGGGCCGATGA 2571 0.4594 MHSKASVLPWLVCICVFLKTREAWAKGAGAPLILGCGLADVGGKDADGRQWEADAKYLSGGNSNTFRASYQDPSLMSEIPYMRARVFTSEAIYKFPVQPDQRYWLRLHFYPSVYGSYDPSNSYFSVTANEVTLLSNFSASITCQALSQAYIIREYSLAPLNSDILTVTFKPSDKYDQAFAFANGIEVIEMPDLFDSATLVGFSEQSVDTKSLNLQTMFRLNVGGQYISPLQDSNLTRAWYDDTPYLYGASVGVTNEADDNVTIDYQTMPHYIAPPTIYSTSRSMGNDKNVNMGYNLTWTFQIDPNFMYLVRFHFCDYYYYRVNEIVFDIYLNNQTAQAEADVIAWSGGKGAPTYKDYVVIVQDGQSNEQLWIALHPSTKTKPEYYDAILNGIEIFKINDTSLAGPNPQPSDMLMKSEQQSQTFNTTTKGSHKKTVLLSAGGAVGVAFLTAICIVMYQKKKRAPGSNSHTSWLPIYGNSPSSGSKSTLSGKSNAGSNISAMAQGLCRHFSLQEIKQATKNFDESNVIGVGGFGKVYKAVIDNGVKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHRHLVSLIGFCEEQSEMCLVYDYMARGTLREHLYKGNKSLSTLPWKQRLEICIGAARGLHYLHTGARYTIIHRDVKSTNILLDENWIAKVSDFGLSKTGPELKNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVLNANLAKEQVSLADWALRCKRNGTLEDIIDPYLKGKINPESLRKFADTAEKCLSDHGLARPSMSDLCWNLELALNLQENTKGSNNPSKGEESDFQEVSLIDNEGGNSTSEHDTSQDSGDSSSAIFSQIINPTGR 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0086 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Acco02g0086 856 Pfam Malectin-like domain 35 397 IPR024788 -
Acco02g0086 856 MobiDBLite consensus disorder prediction 801 856 - -
Acco02g0086 856 FunFam FERONIA receptor-like kinase 31 191 - -
Acco02g0086 856 ProSiteProfiles Protein kinase domain profile. 520 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0086 856 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Acco02g0086 856 FunFam receptor-like protein kinase FERONIA 483 595 - -
Acco02g0086 856 Gene3D Phosphorylase Kinase; domain 1 481 595 - -
Acco02g0086 856 FunFam FERONIA receptor-like kinase 212 398 - -
Acco02g0086 856 FunFam Receptor-like protein kinase FERONIA 596 810 - -
Acco02g0086 856 PANTHER OS07G0166700 PROTEIN 504 799 IPR045272 GO:0004714|GO:0006468
Acco02g0086 856 SMART serkin_6 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0086 856 Gene3D - 35 191 - -
Acco02g0086 856 Gene3D - 212 399 - -
Acco02g0086 856 Gene3D Transferase(Phosphotransferase) domain 1 596 818 - -
Acco02g0086 856 MobiDBLite consensus disorder prediction 821 856 - -
Acco02g0086 856 CDD STKc_IRAK 526 788 - -
Acco02g0086 856 Pfam Protein tyrosine and serine/threonine kinase 524 721 IPR001245 GO:0004672|GO:0006468
Acco02g0086 856 SUPERFAMILY Protein kinase-like (PK-like) 495 793 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0086 Acco-ChrAcco02 780829 783565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0086 32 856 Receptor kinase-like Gene Family AT3G51550 53.432 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Acco02g0086 Malectin_like 4.8e-39 CL0202