Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0085 ATGCCTGGTGTCACTCACTCACTCACTCCTTATGTTGCCGGACAGCTTATCAAGATCCTCATCATGGCCACCGCTGCTCAGCCTAAGTCCAAGAAATCCGCAGTGGCGAGGAAACCTAAAGCCTCGCCCTCACACCCTCCTTTCGCTGAGATGATCACGGATGCGATCGTGAGTCTCAAGGAGAGGACCGGTTCAAGCCAGTATGCCATTACCAAGTTTATCGAGGACAAGCACAAGCATTTGCCCCCCACTTTCAAGAAACTTTTGCTGAACAATTTGAAGAAGTCAGTTTCCGCTGGTAAGCTCGTCAAGGTCAAGAACTCCTTCAAGCTTGCACCCAATAAACCGGCTCCTGCAGCTACGAAGCCCTCAAAATCATCAGTCAAGGCCGTACCTAAGTCTCAGACGAAGCCCGCTGCTAAGCCAAAAGTAGCGGCCAAGCCTAAAGCCGTTTCCAAACCTAAACCCAAACCAGCTGCTGCACGAGGTGCGAAAGTGACTTCGAAGCCGGCTAAGACATCGGCCAGGACCTCGCTGGGGAAGAGGGTAGTCAAGGCGTCCAAGAGTGTGAAGAAGCCCAGGAGTGTGAAATCGCCATCCAAGAAAGAGGTTGTCAAGAAGACTAAGAAGTAG 633 0.5166 MPGVTHSLTPYVAGQLIKILIMATAAQPKSKKSAVARKPKASPSHPPFAEMITDAIVSLKERTGSSQYAITKFIEDKHKHLPPTFKKLLLNNLKKSVSAGKLVKVKNSFKLAPNKPAPAATKPSKSSVKAVPKSQTKPAAKPKVAAKPKAVSKPKPKPAAARGAKVTSKPAKTSARTSLGKRVVKASKSVKKPRSVKSPSKKEVVKKTKK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0085 210 Gene3D - 39 126 IPR036388 -
Acco02g0085 210 MobiDBLite consensus disorder prediction 27 48 - -
Acco02g0085 210 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 44 113 IPR005818 GO:0000786|GO:0003677|GO:0006334
Acco02g0085 210 PANTHER HISTONE H1 28 200 - -
Acco02g0085 210 SMART h15plus2 42 108 IPR005818 GO:0000786|GO:0003677|GO:0006334
Acco02g0085 210 CDD H15 42 123 IPR005818 GO:0000786|GO:0003677|GO:0006334
Acco02g0085 210 Pfam linker histone H1 and H5 family 45 112 IPR005818 GO:0000786|GO:0003677|GO:0006334
Acco02g0085 210 MobiDBLite consensus disorder prediction 112 210 - -
Acco02g0085 210 PRINTS Histone H5 signature 198 210 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Acco02g0085 210 PRINTS Histone H5 signature 137 151 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Acco02g0085 210 PRINTS Histone H5 signature 176 193 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Acco02g0085 210 PRINTS Histone H5 signature 58 75 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Acco02g0085 210 PRINTS Histone H5 signature 31 52 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Acco02g0085 210 SUPERFAMILY "Winged helix" DNA-binding domain 42 124 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0085 Acco-ChrAcco02 778412 780747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0085 51 114 Single Myb Histone (SMH) Gene Family AT1G49950 46.875 5.70e-10 55.8