Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0075 ATGAATCCACATCTTCACCTGCAGGGAACACCAGTGAACATCATTGTAGGTTCTCATGTCTGGAATGAAGATCCAGATGTTGCTTGGATTGATGGACAGGTAACAAAAATCAATGAAGAGGATGCTGAAATTGAAAATACCAATGGAAAAAAGGTTTCTGCTAAATTATCAAAAATATATCCCAAAGATATGGAAGCTCCTGCCGGTGGAGTGGATGATATGACAAAGCTGTCTTATTTGCATGAGCCTGGAGTCTTGCAGAACATAAAATCTAGATATGAATTGAATGAAATATATACCTACACTGGAAATATTCTTATTGCCATAAATCCATTCCAAAGACTACCTCATCTTTATGATTCTCACATGATGCAACAGTACAAGGGAGCTCCATTCGGAGAACTAAGTCCTCATGTATTTGCAGTAGCTGATGTTGCATATAGGGCAATGATCAACGAAGGAAAAAGCAATTCGATTTTGGTCAGTGGGGAAAGTGGAGCCGGTAAAACGGAAACTACAAAAATGCTCATGCAATATTTAGCTTACTTAGGTGGTAGGGCTGCCACAGAAGGAAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACTGTAAGGAACAACAATTCGAGCCGTTTTGGTAAATTTGTTGAGATCCAATTCGATAAGAGTGGAAGAATCTCAGGAGCAGCCATTCGAACTTACCTTCTGGAGAGGTCTCGGGTCTGCCAAATTAATGATCCTGAACGCAACTACCACTGCTTTTATCTCCTCTGTGCTGCACCGCACGAGGAAATTGAGAAATACAAACTAGATCATCCTAGATCGTTTCACTACCTGAACAAATCAAATTGTTATGAACTGGCTGGTGTGAGTGATGCTCGTGAATATCTTGCTACCCGGAGAGCTATGGATGTTGTTGGAATAAGCCAAAAAGACCAGGAAGCAATTTTCCGAGTTGTTGCTGCAATTCTTCATCTTGGTAATATTGTTTTTGCGAAAGGAAAAGAAGCTGACTCATCAGTTCTGAAAGATGACAAAGCAAAATTTCACTTGAAAACAACTGCAGAGCTTCTCATGTGTGATACTAATGCCTTGCAAGATGCATTGTGCAAACGTGTCATGGTCACCCCTGAAGAAGTTATAAAGCGGAGCCTCGACCCCGAAAGTGCGGCAATAAACAGAGATGGCTTCGCAAAAACAATTTATTCTCGGCTGTTTGACTGGTTGGTGGACAAGATTAATAGTTCTATTGGACAAGATCCAAATTCCAAATCTTTGATCGGGGTCCTTGATATCTATGGTTTTGAAAGCTTTAAAACTAACAGTTTTGAGCAGTTCTGCATCAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGGCAAAATCTCAGACCGCATTAAGCATCTCGGTTTCTTGCATATGTTTTATTTCCGAATTTGACAAGTCTGATGATTTGCAGCACGTGTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAGATTGATTGGAGCTACATTGAATTTGTTGATAATCAAGATGTTTTAGACCTTATTGAAAAGAAACCTGGAGGAATTGTCGCTCTCCTTGATGAAGCTTGCATGTTTCCCAAGTCAACACACGAAACATTTGCGAATAAGCTTTATCAAACATTTAAGAATCACAAGCGTTTTATAAAGCCAAAATTGTCTCGAACCGATTTTACCATTGCTCATTATGCTGGGGAGGTCTTGTACCAGTCTGACCAGTTTTTAGACAAAAATAAAGATTATGTGGTTGCTGAACATCAAGATTTGTTGAGCGCTTCCAAATGTCCTTTCGTAGCAGGCCTTTTTCCTCCTCTTCCAGAAGAGACATCTAAATCCTCAAAATTTTCTTCAATAGCTTCTCGTTTTAAGCTACAACTACAGCAACTAATGGACACATTGAACTCGACACAACCTCATTATGTCAGATGTATAAAACCAAACAGTGTCCTTAAGCCCGCAATATTTGAGAATGTCAACATTATGCAACAACTTCGCTGTGGTGGCGTTCTAGAGGCAATTAGAATTAGTTGTGCTGGCTACCCTACTCGCCGTCTTTTCTTTGAATTTGCTCACAGATTTGGAATCCTTGCCCCAGAGGTCGTGGATGGAAACTCTGATGAAAAGGTTGTTTGCCAAAAGATTCTGGAGAAAGTGGGTCTTAAAGGATATCAGATTGGGAAAACAAAGATATTCCTGAGAGCAGGTCAGATGGCTGAACTAGATGCACGGAGGGCTCAAGTTCTCAGCCGGGCAGCTAAAATTATCCAACAGCGCATACGGACCCATCAAGCTCGTAATCATTATCTTGCATTGCTTAGAACTACTGCATTCATGCAGTCTATATGTAGAGGAAGACTGGCATGCAAACATTATGAAAACATGAGAAGGGAGGCCGCTGCAAAGAAAATTCAGAAAAATGTGCGCGGATGTGCAGCTAGAAAATCCTATAAAAGACTACAAGCTTCAGTACTTATCTTGCAAACAGGTTTAAGGACAATGGATGCCCGTAATCAGTTCAGGTTTAGGAAGCGGACTAAAGCTGCTGTCACAATTCAGGCTTGGTGGCGATGCCGGAAGGCTACAATATATTATAAGAGGCTCAAGAAAAGTACTATAGTTGCACAATGCAGATGGCGGGGGCGGTTGGCCAGGAGAGAACTTAGGAAACTCAAAATGGCTTCAAGAGAAACTGGTGCGCTTAAAGAAGCAAAGGATAAGCTGGAAAAACGAGTGGAGGAACTCACTTGGCGTCTGCAATTAGAAAAAGGCTTAAGGTCTAACCTAGAAGAAGCCAAAGCACAAGAAGTAGCAAAACTTCAGAACTCGCTACAGGAGATGCAGAACAAGATTGATGAAACCAATGCTTTACTTGTCAAGGAGCGGGGGAATGCAAAGAAAGTTGTAGAAGAAGCGCCTCCTGTCATTAAAGAAACACAAGTTCTAGTGGAAGACACACAAAAGATTGACTCACTAACACAGGAAGTTGAGAGTCTGAAGACTTCACTACAGTCAGAGAAACAAAAAGCTGAAGATTTCGAAAGAAAATACAATGAATCTCAAGCTTTTAGTGAAGAGCAGGCTAAAAAATTAGAGGACACAGAGAAGAAGGTTCGTCAACTCCAGGAATCATTAACCAGGCTGGAAGAGAAAATTACCAACTTAGAATCAGAGAATCGGGTTCTACGTCAGCAAGCTGTATCCATGGCACCAAATAAGCTCCTTTCAGGACGCTCCAGATCTATTATACAGAGAGGTGCTGAAAGTGGTCATATGGTCGGAGAAGCAAAGATACCCTTGGATCTTCATAGTTCCTCAATTAACCAGAGGGAACGTGCCGAAGTTGACGATAAACCACAAAAATCACTAAATGAGAAACAGCAGGAAAATCAAGAGCTGCTCATCAGATGTATTGTGCAACATGTAGGCTTTGCCGGGAACAGACCTGTTGCTGCATGTATCATATACAAATGTCTCTTGCATTGGAGATCATTTGAAGTTGAGCGCACTAATGTTTTTGATCTTATCATTTCTGCCATTGGCCATAAAATTGAGAACCAGGAAAACAATGATGTCTTGGCTTATTGGTTATCCCATGCGTCCACACTTCTATTGTTGCTCCAACGCACACTTAAGGCAAGTGGTGCAGCTGGAATGGCCCCACAACGCCGTCGTTCTTCATCCGCAACCCTATTCGGGAGGATGACACAGAGTTTCCGTGGAGCCCCTCAGGGAGTTAATCTCTCCTTAATCCATTGTAGAATAAGCGGTGGAGCAGACACATTGCGACAAGTTGAAGCCAAGTACCCAGCTTTGCTTTTCAAACAGCAGCTCACTGCGTATGTAGAAAAAATATACGGAATGATTCGGGATAATCTAAGGAAAGAACTTTCTCCCCCGGTATCGTTGTGCATCCAGGCACCAAGAAAATCAAGAGCAGGCCTTGTTAAGGGACAACTTTCAGTTGCAAATACTGAAGCTCAGAAAGCTTTGATGGGTCACTGGCAGACGATAGTTAATAGTCTTGAGAACTATTTGAATTCTTTGAAAGCCAATCATGTTCCCTCATTTTTGGTTCGTAAGTTGTTTACTCAAATTTTTTCTTATATCAATGTTCAACTATTCAACAGTCTCCTTTTAAGAAGGGAGTGCTGTTCATTTAGTAATGGAGAATTTGTCAAAGCTGGTTTGGCTGAATTGGAGCATTGGTGTTATAAGGCTACAGAAGAGTATGCAGGTTCAGCGTGGGATGAGCTGAAACATATCAGGCAGGCGATTGGATTTCTGGTCATACACCAGAAGCCTAAGAAAACACTGGATGAAATAAGCCATGACCTGTGCCCGGTCCTCAGCATCCAGCAATTATATCGGATCAGCACAATGTACTGGGATGACATGTATGGCACCCATAGCGTTGCAGGTGATGTCATTGCCAGTATGAAAGTATTGATGGCTGAAGATTCGAATATCGCTGTTAGTAGTTCTTTCCTGCTGGATGATGATACAAGCATTCCGTTTTCTGTTGATGATCTGTCAAGGTCGATGGAACAAATAGATATCTCCGATGTTGAGGCCCCACCGCTAATTCGTGAGAACTCTGGCTTTAGTTTCTTGTTGCCAAGCCCAAATTAA 4692 0.4145 MNPHLHLQGTPVNIIVGSHVWNEDPDVAWIDGQVTKINEEDAEIENTNGKKVSAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNIKSRYELNEIYTYTGNILIAINPFQRLPHLYDSHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMQYLAYLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPHEEIEKYKLDHPRSFHYLNKSNCYELAGVSDAREYLATRRAMDVVGISQKDQEAIFRVVAAILHLGNIVFAKGKEADSSVLKDDKAKFHLKTTAELLMCDTNALQDALCKRVMVTPEEVIKRSLDPESAAINRDGFAKTIYSRLFDWLVDKINSSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQAKSQTALSISVSCICFISEFDKSDDLQHVFKMEQEEYTKEQIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSRTDFTIAHYAGEVLYQSDQFLDKNKDYVVAEHQDLLSASKCPFVAGLFPPLPEETSKSSKFSSIASRFKLQLQQLMDTLNSTQPHYVRCIKPNSVLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRLFFEFAHRFGILAPEVVDGNSDEKVVCQKILEKVGLKGYQIGKTKIFLRAGQMAELDARRAQVLSRAAKIIQQRIRTHQARNHYLALLRTTAFMQSICRGRLACKHYENMRREAAAKKIQKNVRGCAARKSYKRLQASVLILQTGLRTMDARNQFRFRKRTKAAVTIQAWWRCRKATIYYKRLKKSTIVAQCRWRGRLARRELRKLKMASRETGALKEAKDKLEKRVEELTWRLQLEKGLRSNLEEAKAQEVAKLQNSLQEMQNKIDETNALLVKERGNAKKVVEEAPPVIKETQVLVEDTQKIDSLTQEVESLKTSLQSEKQKAEDFERKYNESQAFSEEQAKKLEDTEKKVRQLQESLTRLEEKITNLESENRVLRQQAVSMAPNKLLSGRSRSIIQRGAESGHMVGEAKIPLDLHSSSINQRERAEVDDKPQKSLNEKQQENQELLIRCIVQHVGFAGNRPVAACIIYKCLLHWRSFEVERTNVFDLIISAIGHKIENQENNDVLAYWLSHASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPQGVNLSLIHCRISGGADTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLRKELSPPVSLCIQAPRKSRAGLVKGQLSVANTEAQKALMGHWQTIVNSLENYLNSLKANHVPSFLVRKLFTQIFSYINVQLFNSLLLRRECCSFSNGEFVKAGLAELEHWCYKATEEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDMYGTHSVAGDVIASMKVLMAEDSNIAVSSSFLLDDDTSIPFSVDDLSRSMEQIDISDVEAPPLIRENSGFSFLLPSPN 1563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0075 1563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 819 IPR027417 -
Acco02g0075 1563 FunFam unconventional myosin-Va 819 867 - -
Acco02g0075 1563 ProSiteProfiles IQ motif profile. 769 797 IPR000048 GO:0005515
Acco02g0075 1563 Pfam IQ calmodulin-binding motif 819 838 IPR000048 GO:0005515
Acco02g0075 1563 Pfam IQ calmodulin-binding motif 866 885 IPR000048 GO:0005515
Acco02g0075 1563 Pfam IQ calmodulin-binding motif 890 909 IPR000048 GO:0005515
Acco02g0075 1563 PANTHER MYOSIN 61 472 - -
Acco02g0075 1563 Gene3D Kinesin motor domain 70 447 IPR036961 -
Acco02g0075 1563 Pfam DIL domain 1382 1485 IPR002710 -
Acco02g0075 1563 ProSiteProfiles IQ motif profile. 865 892 IPR000048 GO:0005515
Acco02g0075 1563 SMART MYSc_2a 64 767 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco02g0075 1563 CDD MyosinXI_CBD 1145 1529 IPR037975 GO:0007015
Acco02g0075 1563 FunFam unconventional myosin-Va 868 915 - -
Acco02g0075 1563 Gene3D - 701 767 - -
Acco02g0075 1563 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 15 64 IPR004009 GO:0003774|GO:0005524|GO:0016459
Acco02g0075 1563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 819 917 IPR027417 -
Acco02g0075 1563 Coils Coil 946 984 - -
Acco02g0075 1563 Pfam Myosin head (motor domain) 484 754 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco02g0075 1563 Pfam Myosin head (motor domain) 71 472 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco02g0075 1563 Gene3D - 497 657 - -
Acco02g0075 1563 Gene3D - 448 472 - -
Acco02g0075 1563 ProSiteProfiles IQ motif profile. 817 844 IPR000048 GO:0005515
Acco02g0075 1563 ProSiteProfiles IQ motif profile. 792 821 IPR000048 GO:0005515
Acco02g0075 1563 Coils Coil 1044 1085 - -
Acco02g0075 1563 SMART iq_5 864 886 IPR000048 GO:0005515
Acco02g0075 1563 SMART iq_5 768 790 IPR000048 GO:0005515
Acco02g0075 1563 SMART iq_5 887 909 IPR000048 GO:0005515
Acco02g0075 1563 SMART iq_5 791 813 IPR000048 GO:0005515
Acco02g0075 1563 SMART iq_5 839 861 IPR000048 GO:0005515
Acco02g0075 1563 SMART iq_5 816 838 IPR000048 GO:0005515
Acco02g0075 1563 Coils Coil 1002 1036 - -
Acco02g0075 1563 PRINTS Myosin heavy chain signature 516 544 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco02g0075 1563 PRINTS Myosin heavy chain signature 203 230 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco02g0075 1563 PRINTS Myosin heavy chain signature 99 118 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco02g0075 1563 PRINTS Myosin heavy chain signature 436 464 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco02g0075 1563 PRINTS Myosin heavy chain signature 156 181 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco02g0075 1563 ProSiteProfiles IQ motif profile. 888 917 IPR000048 GO:0005515
Acco02g0075 1563 Gene3D Kinesin motor domain 658 700 IPR036961 -
Acco02g0075 1563 ProSiteProfiles Dilute domain profile. 1190 1506 IPR002710 -
Acco02g0075 1563 Gene3D - 819 866 - -
Acco02g0075 1563 Gene3D - 768 818 - -
Acco02g0075 1563 Gene3D - 867 916 - -
Acco02g0075 1563 Coils Coil 911 938 - -
Acco02g0075 1563 CDD MYSc_Myo11 83 754 IPR036018 -
Acco02g0075 1563 Gene3D - 259 314 - -
Acco02g0075 1563 FunFam Myosin heavy chain 259 314 - -
Acco02g0075 1563 SMART DIL_2 1381 1488 IPR002710 -
Acco02g0075 1563 Pfam Myosin N-terminal SH3-like domain 17 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Acco02g0075 1563 ProSiteProfiles Myosin motor domain profile. 69 766 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco02g0075 1563 Gene3D Myosin VI head, motor domain, U50 subdomain 315 426 - -
Acco02g0075 1563 FunFam Myosin 2 319 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0075 Acco-ChrAcco02 705270 717433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0075 9 1560 Myosins gene family AT1G54560 79.652 0.0 2599