Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco02g0070 | ATGCAACAGAAATATGCGACTACTCCGGAACTTCTAATTATATTTCTCTCCCCTCTCCATCTTCTTCCTCTGTTCCCTGCTCAGCAAAATGCTATACCTTTAAGTGGGATCAACTCACAGGAAAACGAAGACCCTTTTAAAATGCAGTCCTTCTTGTTATTCCACTGTTTCATTGCCCTCTCTCTTGTTTTTGCCGAGGGAGCTCAATCTGCATTTAGTGATGAATTGTCAACACTCCTCTCAATCAAATCCAGTCTCGTTGATCCAATGAAGCACCTGAATGATTGGCAGACCCATGATGGTTCATGGCCGTCACCCCACTGTAACTGGACTGGGGTTTGGTGCAACTATAAAGGCTTCGTAGAGAGACTCGACCTCTCCAACATGAACCTTAGTGGTCGTGTTTCAGACCACATTCAAGCACTTTCAAGTCTGTCCTTTTTCAACATAAGTTGCAACAATTTCGCTTCTTCATTGCCAAGATCACTGTCCAATCTCACTTCCTTGAAGAGCTTTGATGTGAGCCAGAACTACTTCACTGGCAGCTTTCCTACGGGTCTTGGGAGTGCCACTGGATTGAGATCAATTAACGCGTCAAGCAATAACTTTTCTGGTTTTCTTCCCGAGGATCTTGGGAATGCAACGTTGCTTGAAAGCATTGATTTTCGTGGGGGCTACCTTGAAGGCTCAATCCCCATTAATTTCAAGAATTTACAGAAGCTCAAATTTTTTGGGCTCTCAGGGAATAACTTTACGGGGAACATTCCGGGACAGCTTGGAGAACTTACTTCTCTAGAGACACTAATTCTTGGGTACAATGCGTTTGAAGGAGAGGTCCCTTCAGAGTTTGGCAACCTCACCAATCTTCAGTACCTAGACTTGGCTGTGGGTAGTCTCAGTGGACAGATTCCACCACAATTGGGTAAGCTGAAAAAGCTTAATACACTATTCTTGTACAGGAACAAGTTTGAAGGAAAGATTCCCCCTGAGATTGGCAACATTATGTCACTGGAGTATCTGGACCTGTCTGACAACTTGATTTCAGGGAATATCCCTGAGGAAATTGCTGAACTGAAGAACTTGCAGCTATTAAATGTAATGAGAAACAAACTAACAGGTTTTGTACCAGAAAAGCTTGGGGAGCTGAAGAAACTAAAAGTACTTGAGCTATGGAAAAATTCTTTGCAAGGTCCTTTGCCGGCGAATCTTGGACGGAACTCTCCACTGGAGTGGTTGGACGTGTCTTCTAACTCGTTATCAGGTGAAATTCCTCCAGGTTTGTGTGCTTCCGGAAATCTCACTAAACTGATACTTTTCAGTAATTCCTTCTCTGGTTCCATTCCAAGTGGGATTTCAAATTGTTCTTCTTTGGCACGTGTTCGCATTCATAACAATCTTCTATCTGGGACTATTCCAATTGGTTTCGGAAAACTCCCAAATCTTCAAAGGCTGGAATTGGCTAGGAATTACATCACCAGCCAAATTCCAATAGATATCACTTCATCCACTTCACTTTCTTTCATTGACGTATCTTGGAACCACCTTGAATCATCTCTACCTTCTGGAATTCTCTCTATTCCCACCCTTCAAACCTTCATTGCGTCCAACAACAACTTGGGAGGCAATATACCAGGTGAGTTCCAGGACTGCTTGTCTCTCTCTGTGCTGGATCTTTCAAACAACCTTATATCTGGAGAAATCCCAGAAAGCATTGCTTCTTGCCAAAAACTAGTCCATTTGAACCTCGGGAGCAACCAATTAACTGGGGAAATCCCGAAATCAACTGCAAACATGCCCACCTTAGCCACTCTTGATCTGTCCCACAATATGCTTTCAGGCCGGATACCTGAAAACCTTGGCAGCTCCCCTGCTCTTGAAACCATCAACCTATCCTACAACAAGCTCGAGGGTCCAGTGCCCTCCAATGGGATTTTGATGACCATAAACCCTAATGATCTCGCCAACAATGCCAATCTCTGCGGAGGCATTCTTCCTCCATGTTCTCAGAGCTCAACTCGGGTAAGCCAGCGAAGGAGCTCACACACAAAGCATATCATGGTCGGTTTTATCTCAGGAATATCAGTAATTGTGGCACTGGGCATTGCTTATATGGGTGGGAGATGGTTGTACAATAAATGGTACTTATACAACAGTTTCGTCCACGATTGGTTCAAAGACAACAGCGAAGAATGGCCTTGGAGATTAGTGGCATTCCAGAGGGTCAGTTTCACAAGTAGTGAGATTCTCGCTTGCATTAAGGAACCAAATATTATAGGCATGGGAGGCACTGGGATCGTGTATAAAGCCGAAATTCATAGACCTCATGCAACGGTAGCAGTGAAGAAACTATGGAGGCCAGGGGCAGACATAGAAGATGGGAATGACGTGTTGAAAGAAGTGAATCTGTTAGGGAGATTGAGGCATAGGAATATTGTGAGGTTGTTGGGGTATGTTCACAACGAAAGGGAAGTGATGATGTTGTATGAGTTCATGCCCAATGGAAATCTTGGGGCAGCACTTCATGGAGAGCAAGGAGAAAGGTTACTGGTAGATTGGATTTCAAGGTATAACGTAGCTGTTGGAGTTGCCCAAGGCCTCCATTATCTCCACCATGATTGTCACCCCCCAGTTATTCACAGAGACATCAAGTCTAACAATATACTGCTTGACGCTAATTTGGAGGCAAGGATAGCTGATTTCGGATTAGCAAAAATGCTGATCCATAAGAATGAGACCGTTTCAATGGTGGCTGGATCTTATGGGTACATCGCACCAGAGTATGGATATACTCTGAAAGTGGACGAGAAAATCGACATATACAGTTACGGGGTAGTGCTTCTGGAGCTCGTAACAGGGAAAAAGCCTTTGGACCTGTCATTCGAAGAATGTGGAGACATAGTTGAATGGGTAAGAAAGAAAAGAAGCAATGGAGGGTTGGAAGAAGCACTAGATCCCACCATAGCGGGAAGGTGCAAGCACGTCCAAGAAGAGATGCTTCTTGTGCTCCGAATTGCACTTCTCTGTACGGCAAAGCTTCCAAAGGAAAGACCATCCATGAGAGACATAGTGATGATGCTGGGAGAGGCAAAACCCAGAAGAAAAAGCAACACTCAAAATGGAACACACGACGTTTTCACCGCCTCTCCCATCATAAGCCTTCTCTAG | 3165 | 0.4433 | MQQKYATTPELLIIFLSPLHLLPLFPAQQNAIPLSGINSQENEDPFKMQSFLLFHCFIALSLVFAEGAQSAFSDELSTLLSIKSSLVDPMKHLNDWQTHDGSWPSPHCNWTGVWCNYKGFVERLDLSNMNLSGRVSDHIQALSSLSFFNISCNNFASSLPRSLSNLTSLKSFDVSQNYFTGSFPTGLGSATGLRSINASSNNFSGFLPEDLGNATLLESIDFRGGYLEGSIPINFKNLQKLKFFGLSGNNFTGNIPGQLGELTSLETLILGYNAFEGEVPSEFGNLTNLQYLDLAVGSLSGQIPPQLGKLKKLNTLFLYRNKFEGKIPPEIGNIMSLEYLDLSDNLISGNIPEEIAELKNLQLLNVMRNKLTGFVPEKLGELKKLKVLELWKNSLQGPLPANLGRNSPLEWLDVSSNSLSGEIPPGLCASGNLTKLILFSNSFSGSIPSGISNCSSLARVRIHNNLLSGTIPIGFGKLPNLQRLELARNYITSQIPIDITSSTSLSFIDVSWNHLESSLPSGILSIPTLQTFIASNNNLGGNIPGEFQDCLSLSVLDLSNNLISGEIPESIASCQKLVHLNLGSNQLTGEIPKSTANMPTLATLDLSHNMLSGRIPENLGSSPALETINLSYNKLEGPVPSNGILMTINPNDLANNANLCGGILPPCSQSSTRVSQRRSSHTKHIMVGFISGISVIVALGIAYMGGRWLYNKWYLYNSFVHDWFKDNSEEWPWRLVAFQRVSFTSSEILACIKEPNIIGMGGTGIVYKAEIHRPHATVAVKKLWRPGADIEDGNDVLKEVNLLGRLRHRNIVRLLGYVHNEREVMMLYEFMPNGNLGAALHGEQGERLLVDWISRYNVAVGVAQGLHYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMLIHKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELVTGKKPLDLSFEECGDIVEWVRKKRSNGGLEEALDPTIAGRCKHVQEEMLLVLRIALLCTAKLPKERPSMRDIVMMLGEAKPRRKSNTQNGTHDVFTASPIISLL | 1054 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco02g0070 | 1054 | ProSiteProfiles | Leucine-rich repeat profile. | 552 | 574 | IPR001611 | GO:0005515 | |
| Acco02g0070 | 1054 | Gene3D | Ribonuclease Inhibitor | 298 | 357 | IPR032675 | - | |
| Acco02g0070 | 1054 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 877 | 889 | IPR008271 | GO:0004672|GO:0006468 | |
| Acco02g0070 | 1054 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 72 | 224 | - | - | |
| Acco02g0070 | 1054 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 327 | 408 | - | - | |
| Acco02g0070 | 1054 | Gene3D | Transferase(Phosphotransferase) domain 1 | 835 | 1048 | - | - | |
| Acco02g0070 | 1054 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 409 | 671 | - | - | |
| Acco02g0070 | 1054 | Pfam | Leucine Rich repeat | 335 | 349 | IPR001611 | GO:0005515 | |
| Acco02g0070 | 1054 | Gene3D | Ribonuclease Inhibitor | 358 | 671 | IPR032675 | - | |
| Acco02g0070 | 1054 | ProSitePatterns | Protein kinases ATP-binding region signature. | 758 | 782 | IPR017441 | GO:0005524 | |
| Acco02g0070 | 1054 | SUPERFAMILY | L domain-like | 106 | 396 | - | - | |
| Acco02g0070 | 1054 | Pfam | Leucine rich repeat | 527 | 587 | IPR001611 | GO:0005515 | |
| Acco02g0070 | 1054 | Pfam | Leucine rich repeat | 456 | 515 | IPR001611 | GO:0005515 | |
| Acco02g0070 | 1054 | SMART | serkin_6 | 752 | 1045 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco02g0070 | 1054 | Pfam | Protein kinase domain | 756 | 960 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco02g0070 | 1054 | FunFam | MDIS1-interacting receptor like kinase 1 | 835 | 1044 | - | - | |
| Acco02g0070 | 1054 | FunFam | MDIS1-interacting receptor like kinase 1 | 752 | 834 | - | - | |
| Acco02g0070 | 1054 | ProSiteProfiles | Protein kinase domain profile. | 752 | 1045 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco02g0070 | 1054 | PANTHER | RECEPTOR KINASE-LIKE PROTEIN XA21 | 227 | 1021 | - | - | |
| Acco02g0070 | 1054 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 225 | 326 | - | - | |
| Acco02g0070 | 1054 | ProSiteProfiles | Leucine-rich repeat profile. | 336 | 358 | IPR001611 | GO:0005515 | |
| Acco02g0070 | 1054 | Gene3D | Ribonuclease Inhibitor | 72 | 229 | IPR032675 | - | |
| Acco02g0070 | 1054 | SUPERFAMILY | RNI-like | 299 | 649 | - | - | |
| Acco02g0070 | 1054 | SMART | LRR_typ_2 | 142 | 166 | IPR003591 | - | |
| Acco02g0070 | 1054 | SMART | LRR_typ_2 | 598 | 622 | IPR003591 | - | |
| Acco02g0070 | 1054 | SMART | LRR_typ_2 | 310 | 334 | IPR003591 | - | |
| Acco02g0070 | 1054 | SMART | LRR_typ_2 | 382 | 406 | IPR003591 | - | |
| Acco02g0070 | 1054 | SMART | LRR_typ_2 | 478 | 502 | IPR003591 | - | |
| Acco02g0070 | 1054 | SMART | LRR_typ_2 | 262 | 285 | IPR003591 | - | |
| Acco02g0070 | 1054 | SUPERFAMILY | Protein kinase-like (PK-like) | 748 | 1026 | IPR011009 | - | |
| Acco02g0070 | 1054 | Gene3D | Ribonuclease Inhibitor | 230 | 297 | IPR032675 | - | |
| Acco02g0070 | 1054 | Gene3D | Phosphorylase Kinase; domain 1 | 752 | 834 | - | - | |
| Acco02g0070 | 1054 | Pfam | Leucine rich repeat N-terminal domain | 74 | 116 | IPR013210 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco02g0070 | Acco-ChrAcco02 | 647873 | 651574 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco02g0070 | 51 | 1054 | Receptor kinase-like Gene Family | AT1G08590 | 62.927 | 0.0 | 1247 |
Transcription factors information