Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0066 ATGACTTTGGCAACGCAAGAAAGGGAGAACAGGGCTAACCGGAAACTTGCCAAAAAGGATTATCATCCTTGGCTTCTGAAGTTGTATTTAGGTAAATCCGATTCCATAAAGCCCAAATCGCATCCATTCAGACGCCGGCTTCACTGCTGCATCATTCTCATTCCCTACTGCCTCCACTTCCCTTTTCGCATCTGCCTTTGCTCAGATTCCAAGCTTATCCAACGTAATACCTGCTCGTTCTGTTCCCTCTCAGCTCCAGGTCAGACAAAGCTGAGTCCCTTGGGAGACTTCAGGGCGACGCCTTCATCTTTTCCTCTTCTTCCCACTCGTATTGAAGACAAATATATGAAACCTCTAGATTCTTTTTCCTCCACTGCACGAGACCTGAATGCAAATTCTGCCTCAGTGCAGGCTGCTTCATCAAATTCCAACCTCAGAAGTGGTTGGCACATGTTTTCATCACCTTCTAAATGCCTGAATGGCATGTCTTTATCCTCAATTTCACAACATGATAAGCACTATCAAGATTATCCCTTCATTTCTAAGACATTGAGAAGAGATGATGTGATGCCCCGGCTAGGAGCTTCCCTTACTCAGAGTGGGGAAGATGCGTCTTTCCCACCTTCACATTCTTCTCGTCCAGAAATGCATTCGGCAGCGTTCATTTCTCAACCCCCGGAAAGTGATGATATTTCCTGGGGACCAGATCCCTTTCAGGATATTCTTAATCTCTCTGTAAATGATTCAGTCCAGAATGATCAGATGGAAAGTAGTTCTTGTTATATGTCTGATGACAACCCGAAAAAATCTGAGTTTGCGGAGTGGGTAGATCAGTTAATATCAGTTGATGAATCTCCTCATCCAAACTGGAACCAGCTTCTTGTTGACGATAAAGTACCAGATTCAAAATCAAAGGAGACCTACACCGCCAAGCAGCAGCATGCACCATCTGGAGAAGTTAATGTTTCTCCTACTTCAGCGTCAAATGCACAACAAAGTAAGCCTAGAATGCGTTGGACTCCAGAGCTTCATGAAGCTTTCGTGGAAGCAGTGAATAAGCTTGGGGGCAGCGAGAAGGCTACTCCCAAGGGTGTTTTGAACCTAATGAAAGTTGATGGTCTTACCATCTATCATGTGAAAAGCCATCTACAGAAGTATAGAACAGCCAGATTTAAACCCGAATCATCAGGAGGAGCTTCTGAGAAGAAGTCGACATCAACCAAAGAAATGAAATCTTCAGATTTGACAGCCATGGGGATTACTGAAGCATTGCGGTTGCAGATGGAACTCCAGAAGCGGCTTCATGAACAACTTGAGATTCAAAGAAAGTTGCAGATGCAAATAGAAAACCAAGGGAAGTGTCTTCAGATGATGTTTGAGAAACAAAGAGAGATGGAGGACAGCAAACAGAAAACATCATCCCCCTCCTCAGATAAGCCCATAGTAATAACTTCCCCAACAAATGAGGATCAAGGAGCAACAACCATGGTCGAGGAATGTTCTGAGGATGCCTGTATAAAGCAAGAGGTGGAAGAAACTAAAGTTACTAATGAAGATGCGGGCTATGATCAGTTACCAGCCTCCAAACGGGTGAAAAGTGTATGA 1605 0.4411 MTLATQERENRANRKLAKKDYHPWLLKLYLGKSDSIKPKSHPFRRRLHCCIILIPYCLHFPFRICLCSDSKLIQRNTCSFCSLSAPGQTKLSPLGDFRATPSSFPLLPTRIEDKYMKPLDSFSSTARDLNANSASVQAASSNSNLRSGWHMFSSPSKCLNGMSLSSISQHDKHYQDYPFISKTLRRDDVMPRLGASLTQSGEDASFPPSHSSRPEMHSAAFISQPPESDDISWGPDPFQDILNLSVNDSVQNDQMESSSCYMSDDNPKKSEFAEWVDQLISVDESPHPNWNQLLVDDKVPDSKSKETYTAKQQHAPSGEVNVSPTSASNAQQSKPRMRWTPELHEAFVEAVNKLGGSEKATPKGVLNLMKVDGLTIYHVKSHLQKYRTARFKPESSGGASEKKSTSTKEMKSSDLTAMGITEALRLQMELQKRLHEQLEIQRKLQMQIENQGKCLQMMFEKQREMEDSKQKTSSPSSDKPIVITSPTNEDQGATTMVEECSEDACIKQEVEETKVTNEDAGYDQLPASKRVKSV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0066 534 MobiDBLite consensus disorder prediction 301 336 - -
Acco02g0066 534 MobiDBLite consensus disorder prediction 388 412 - -
Acco02g0066 534 Pfam Myb-like DNA-binding domain 336 387 IPR001005 -
Acco02g0066 534 MobiDBLite consensus disorder prediction 309 336 - -
Acco02g0066 534 MobiDBLite consensus disorder prediction 515 534 - -
Acco02g0066 534 MobiDBLite consensus disorder prediction 474 494 - -
Acco02g0066 534 Coils Coil 421 441 - -
Acco02g0066 534 FunFam Myb family transcription factor 333 391 - -
Acco02g0066 534 MobiDBLite consensus disorder prediction 197 217 - -
Acco02g0066 534 Pfam MYB-CC type transfactor, LHEQLE motif 418 464 IPR025756 -
Acco02g0066 534 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 323 505 IPR044848 GO:0003700
Acco02g0066 534 MobiDBLite consensus disorder prediction 461 494 - -
Acco02g0066 534 NCBIfam myb-like DNA-binding domain, SHAQKYF class 334 388 IPR006447 GO:0003677
Acco02g0066 534 SUPERFAMILY Homeodomain-like 332 388 IPR009057 -
Acco02g0066 534 Gene3D - 333 392 - -
Acco02g0066 534 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 331 391 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0066 Acco-ChrAcco02 582998 587855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0066 129 477 G2-like Transcription Factor Family AT3G04450 44.142 1.31e-73 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco02g0066 Myb_DNA-binding 1e-08 CL0123