Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0060 ATGACGAGGACTCCTTGTTGTGAGAAAATGGGATTGAAGAAGGGACCGTGGACTCCTGAAGAAGATCAGATTTTGATCTCTTATATTCAAAGACATGGCCATGGAAACTGGCGGGCTCTTCCCAAACAGGCTGGTTTATTGAGGTGTGGAAAGAGTTGCAGGCTTCGATGGATAAATTACTTGAGACCAGATATAAAACGAGGCAAATTCAGCAAGGAAGAAGAAGAAACCATCCTCAAGCTGCATCAGATTCTGGGAAATAGATGGTCTGCTATAGCGGCGAGATTGCCAGGACGAACAGATAATGAAATAAAGAACTTTTGGCACACCCACTTGAAGAAGAGGCTGGAAACGTGCCAAGTGCGTCATGTAAGTGCGTCGTCCTCTTGTACACAAGCATCTTCAAGCAAAGGGGTCGTGATACCGCCCATGCCACAGTCAGTAGAATCATCAAGTGCTACTAATTTTGGTTTCACTGGCAAAGTTCTTATGAGTACTGCCAATGAGGGTTTAGCGCCAAGGAGATATGTGGCCACTGTAGATTCAGGGTTTCGTCATGGTGGACATTCTTATGATGCGTCTGGGGAAACCCTAGGCGGCCATAGAGCTAACAAGATCAGTGAAGAAATGGAATTTTGGTATGATCTGTTCGTGAAAGCCGGACAGCCGCCGCAAGGGCATGGAAATCTTGGACAGATTGCATGA 705 0.461 MTRTPCCEKMGLKKGPWTPEEDQILISYIQRHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEETILKLHQILGNRWSAIAARLPGRTDNEIKNFWHTHLKKRLETCQVRHVSASSSCTQASSSKGVVIPPMPQSVESSSATNFGFTGKVLMSTANEGLAPRRYVATVDSGFRHGGHSYDASGETLGGHRANKISEEMEFWYDLFVKAGQPPQGHGNLGQIA 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0060 234 Gene3D - 69 116 - -
Acco02g0060 234 CDD SANT 69 112 IPR001005 -
Acco02g0060 234 FunFam MYB-related transcription factor 13 66 - -
Acco02g0060 234 Gene3D - 13 66 - -
Acco02g0060 234 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco02g0060 234 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Acco02g0060 234 CDD SANT 16 61 IPR001005 -
Acco02g0060 234 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Acco02g0060 234 FunFam MYB transcription factor 69 139 - -
Acco02g0060 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco02g0060 234 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 131 - -
Acco02g0060 234 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco02g0060 234 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco02g0060 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco02g0060 234 SMART sant 66 114 IPR001005 -
Acco02g0060 234 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0060 Acco-ChrAcco02 553077 554129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0060 1 218 MYB Transcription Factor Family AT2G31180 48.971 1.21e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco02g0060 Myb_DNA-binding 9.1e-16 CL0123