Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0057 ATGGGGACAGAACTCATGAGAACATGTGTTCAAGAAGATAACGATGAGTTTCCATCAGTTCCACCTGGCTTTGAGTCATATACATCTTCCTCACTGAATACAGGGGAAGGCAGTGAGAAACATAATGATAAAACCATGATTAATTTTTCTGTCTCTACAAGTGTCTCTAATTGTAAATCACAGTCAATTCAGGCTAAAACTGATGTTCATGCTAGTGATACTGCCAAGGTTCATAGTTCCTTTCGACGAAGACGATGGATCAACCATGGACGGTATGATAACAGTTCAGAGGAAGACTCTGATTCTGAGCGGCTTGATCAAAATTTTTCCTCGGTGCCTGGTCTTCCAAAGGGAGTTATCCGTGGATGTCCAGATTGCAGTAATTGCCAAAAGGTTATTGCCAGATGGAGACCAGAAGATGCTTGCAGGCCCACCCTTGAGGATGCTCCCGTTTTTTACCCAACTGAAGAGGAGTTTCGAGACACCTTGAAATATATAGCAAGTATTTGTTCCAGAGCAGAACCATATGGCATTTGTCGCATTGTTCCCCCTTCGTCATGGAAGCCCCCATGTCCTCTTAAGGGAAAGGCTATATGGGAGGGTTCTAAATTTGCTACTCGAGTTCAGAGGGTTGATAAGCTTCAGAATCGTGATTCAATGAGAAAGATGTCAAGGATTCATCTTAATACGAGACGGAAAAGGAAAAGATGCTATAGAATGGGATTGGATAATGGCAGTAATAGAGGACCTAATACAGGATTTTGTGAGATTGAAAGGCCCTTTGGGTTTGAACCTGGCCCAGAATTTACTTTGGAAACATTTCAGAGATATGCAGATGAATTTAAGGCCACATACTTCAGAAAGAATGATAATATATCTAATATGGGAGGTAATACAACAATGTCGAAGGGATGGGAGCCTTCTGTGGAGAACATAGAGGGTGAATATTGGCGAATGGTGGAGAGACCTACTGAAGAAATTGAGGTGCTTTATGGAGCTGACCTGGAAACCGGGGTTTTTGGGAGTGGTTTTCCCAGAAAGCTTAGTGAAGTTGGTTCTGATTTACACACAGAGTACATAAAGTCTGGCTGGAATTTGAATAACTTTGCTAGGCTTCCTGGATCTCTGCTTTCGTATGAAAGCAGTGATATATCTGGTGTCCTTGTGCCCTGGCTGTATATAGGAATGTGCTTTTCTTCCTTTTGTTGGCATGTGGAGGATCACCATTTATATTCCTTGAATTACATGCATTGGGGTGCTCCAAAAATGTGGTATGGTGTCCCTGGCAAAGATGCTTGCAAACTGGAAGAGGCCATGAGAAAGTTTTTGCCGGGCCTTTTTAAAGAACAACCTGATTTGCTTCATAAGCTGGTCACTCAGCTTTCTCCTTCTATCCTTAAGTCTGAAGGAGTACCTGTCTATAGGTGTGTTCAGAATCCTGGAGAGTTTGTTCTGACATTCCCTCGAGCTTATCATTCTGGATTCAATTGTGGCTTCAACTGTGCAGAGGCTGTTAATGTAGCTCCAGTTGACTGGCTGCCCCATGGGCAGATTGCCATTGAGCTATACCGGGGTCAAGGACGTAAGACTTCTATATCTCATGATAAACTGTTGCTTGGGGCTGCTAGGGAAGCTGTGCGAGCACTGTGGGAGCTTAACCTGCAGAAGAAGAATACTTCAGTTAATCTAGAATGGAAAGATGTCTGTGGAAAAGATGGTGTCCTAGCAAAAGCACTCAAGACACGTGTTGAGATGGAACAAGTGAGGAGGAAATTTCTCTGCAGTTCTTCACAGGCATTGAAAATGGAGAGCAGTTTTGATGCCACAAATGAAAGGGAATGCAGTGTTTGCTATTTTGATTTACACTTATCTGCAGCTGGTTGCCATTGTTGTCCAGACCGATATGCTTGCTTGGATCATGCAAAGCAGTTCTGTTCATGTGCTTTGGATTCCAAATTCTTCCTCTTCCGTTATGATATTAGTGAATTATTTATCCTCATCGAGGCATTGGAAGGAAAGTTAAGTTCAGTATACAGATGGGCAAAATTAGATCTTGGTTTGGCACTAACTTCTTCTATATCAAAAGACAAAAGCCGATGTAGCAACTTAACTCAATCCTCAAAGGAAACAATGCTTCACAAATTGAGATTAGATTCCTCAGATCTGTCTGGTTCTTCTTGTGGCACTATGCTTAAAGAGACAACGTTGCATCCATCAGTTGTCTCTATTGAAGATTCTCGTTTGATAGATGTCCCAATAGAGAATCTGAGTTTTATAAAACTAAGAAAATCTGCAGAAGATGTGATTTCCTTGGGTTATTCAAAAGAACCGTCTACATCTAATTTCTGGACAACACCATGTGAGATGACTAGTCACGAGAGAGATTCTGAGAAAGAGTCAGTTATTTGCAAATCTACTGTTGAGAATCCTGTTTGTCAGTTGCCTTTAGGGGGCACCTCCTCTCCTTCACCTCTTCCTTTAGCTGAACATGGACCTAAGAAAACTCCTTATGGGCATGATAATGTTATACTTCTTAGTGATGACGAAACTGATGAACCTAAGATGACAGAAACAGATAGCAAGAAGGAGCTTTCTCAAAGGCTTATAGGTTACTGTGATAAACTTAACCCATGTAATTATAGAGAAGATCCAGATGGGACTGTCCCTGTCACAGATGCTGCTTTAAAGGTTGGGAATGATGTGCCTCATGAAAATATGAGTTCTCATTCAACTTACCATTTGCATGTGAAACAGGAACATGGTGTTATTAAGGGAGCAGTTTTAGATTCTACTCCAGTAGATTTATCCTGCAATATTGGTTATGGTAGTGCAGAGTTGGTAGGACAAATTCGGGCTTCCTCAACAAGAGAGAGTAGAGATCATTGTCTGGATTCTTCAGAGAGTTGTCCTCTGAATCCACTGCATTCTGAGACTGTCAAGCCTAAGAACGAGGACAACCATGAGAAGATTGGAGTATGTAGTGCAGATAATGCTGGAGCTGTTAACGGAATCCTGTCCTGTAGTCCAAACCATTTGGGAAGATACTATCGTCAAAAAGGTCCTCGTATAGCAAAGGTTGTCCGGCGCATCAACTGCAATGTTGAGCCTCTGGAGTTTGGAATCGTGTTTGCTGGAAAGTCATGGTGCAACAGTCGGACTATATTTCCTAAGGGATTTCGAAGCTGTGTAAGATACATGAATGTCTTAGATCCAACAAGTATGTGTTGTTATATTTCAGAAATTCTTGATGCTGGACGAGATGGGCCTCTGTTTATGGTGTCCTTGGAACATCACCCAAGTGAGGTGTTCATTCATCTTTCTGCCGTTAGATGCTGGGAACTGGTACGAGAGAGAGTGAATCTGGAAATCACCAAGCAACATAAGCTGGGAAGAAAGGACCTTCCGCCTTTGCAGCCACCTGGTAGCATTGATGGCTTTGAAATGTTTGGGTTTTCTTCGCCAGCTATAGTGCAGGCTATCGAGGCATTGGATCAAAATCGGGTCAGTAAGGAATATTGGGATTCGCGGCCCTTTTCACGGGCTCTAGGTCAATTTCAGCAAACTTCACGGCCCAAAGAAAATGGTGGAAGTGCGGATGGGCCTTTCCAGGGGGGAAACGTTCAAGGGGTCCACAGAAATGAGGTTGTCCCTGTTGGAATAGATGCAGTGTTAAGGAGCCTGTTCAAAAAAGCTAATGAACAAGAATTGAACTCGTTGTGCCGCATTCTTTGTGACGACAATAACAATACTGCAGCTGACGGTAGCCTTGTTGTACAACTTCTTAACGAAGAGATCAGCAGTCGTCCCAGATGA 3813 0.4264 MGTELMRTCVQEDNDEFPSVPPGFESYTSSSLNTGEGSEKHNDKTMINFSVSTSVSNCKSQSIQAKTDVHASDTAKVHSSFRRRRWINHGRYDNSSEEDSDSERLDQNFSSVPGLPKGVIRGCPDCSNCQKVIARWRPEDACRPTLEDAPVFYPTEEEFRDTLKYIASICSRAEPYGICRIVPPSSWKPPCPLKGKAIWEGSKFATRVQRVDKLQNRDSMRKMSRIHLNTRRKRKRCYRMGLDNGSNRGPNTGFCEIERPFGFEPGPEFTLETFQRYADEFKATYFRKNDNISNMGGNTTMSKGWEPSVENIEGEYWRMVERPTEEIEVLYGADLETGVFGSGFPRKLSEVGSDLHTEYIKSGWNLNNFARLPGSLLSYESSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDACKLEEAMRKFLPGLFKEQPDLLHKLVTQLSPSILKSEGVPVYRCVQNPGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYRGQGRKTSISHDKLLLGAAREAVRALWELNLQKKNTSVNLEWKDVCGKDGVLAKALKTRVEMEQVRRKFLCSSSQALKMESSFDATNERECSVCYFDLHLSAAGCHCCPDRYACLDHAKQFCSCALDSKFFLFRYDISELFILIEALEGKLSSVYRWAKLDLGLALTSSISKDKSRCSNLTQSSKETMLHKLRLDSSDLSGSSCGTMLKETTLHPSVVSIEDSRLIDVPIENLSFIKLRKSAEDVISLGYSKEPSTSNFWTTPCEMTSHERDSEKESVICKSTVENPVCQLPLGGTSSPSPLPLAEHGPKKTPYGHDNVILLSDDETDEPKMTETDSKKELSQRLIGYCDKLNPCNYREDPDGTVPVTDAALKVGNDVPHENMSSHSTYHLHVKQEHGVIKGAVLDSTPVDLSCNIGYGSAELVGQIRASSTRESRDHCLDSSESCPLNPLHSETVKPKNEDNHEKIGVCSADNAGAVNGILSCSPNHLGRYYRQKGPRIAKVVRRINCNVEPLEFGIVFAGKSWCNSRTIFPKGFRSCVRYMNVLDPTSMCCYISEILDAGRDGPLFMVSLEHHPSEVFIHLSAVRCWELVRERVNLEITKQHKLGRKDLPPLQPPGSIDGFEMFGFSSPAIVQAIEALDQNRVSKEYWDSRPFSRALGQFQQTSRPKENGGSADGPFQGGNVQGVHRNEVVPVGIDAVLRSLFKKANEQELNSLCRILCDDNNNTAADGSLVVQLLNEEISSRPR 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0057 1270 Gene3D Cupin 134 508 - -
Acco02g0057 1270 SMART JmjN_1 148 189 IPR003349 -
Acco02g0057 1270 MobiDBLite consensus disorder prediction 814 838 - -
Acco02g0057 1270 Gene3D - 1034 1168 - -
Acco02g0057 1270 FunFam Putative lysine-specific demethylase JMJ16 1032 1170 - -
Acco02g0057 1270 PANTHER LYSINE-SPECIFIC DEMETHYLASE 141 848 - -
Acco02g0057 1270 Pfam jmjN domain 150 183 IPR003349 -
Acco02g0057 1270 SMART cupin_9 361 524 IPR003347 -
Acco02g0057 1270 ProSiteProfiles JmjN domain profile. 149 190 IPR003349 -
Acco02g0057 1270 Pfam F/Y rich C-terminus 1088 1172 IPR003889 GO:0005634
Acco02g0057 1270 Pfam C5HC2 zinc finger 614 663 IPR004198 -
Acco02g0057 1270 ProSiteProfiles FYR domain FYRN motif profile. 1026 1084 IPR003888 GO:0005634
Acco02g0057 1270 MobiDBLite consensus disorder prediction 1183 1203 - -
Acco02g0057 1270 MobiDBLite consensus disorder prediction 91 105 - -
Acco02g0057 1270 MobiDBLite consensus disorder prediction 91 110 - -
Acco02g0057 1270 SMART fyrn_3 1040 1084 IPR003888 GO:0005634
Acco02g0057 1270 ProSiteProfiles FYR domain FYRC motif profile. 1086 1176 IPR003889 GO:0005634
Acco02g0057 1270 SUPERFAMILY Clavaminate synthase-like 266 551 - -
Acco02g0057 1270 Pfam JmjC domain, hydroxylase 391 507 IPR003347 -
Acco02g0057 1270 MobiDBLite consensus disorder prediction 13 42 - -
Acco02g0057 1270 ProSiteProfiles JmjC domain profile. 361 524 IPR003347 -
Acco02g0057 1270 Pfam F/Y-rich N-terminus 1040 1081 IPR003888 GO:0005634
Acco02g0057 1270 SMART fyrc_3 1090 1184 IPR003889 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0057 Acco-ChrAcco02 528404 535030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0057 1 1268 JUMONJI Transcription Factor Family AT1G08620 53.505 0.0 1203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Acco02g0057 JmjC 4.7e-46 CL0029