Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco02g0053 | ATGGAGCAGATCCTTCAAAACAACCATTATCAACTTTGCGATGAGATCGGACGTGGCCGATTCGGCACCATCTTCCGCTGCATGCACCTCCTCTCCGGACAACTCTTTGCCTGCAAACTCATCGACAAGCGTCTCCTCTCCGATCCCACCGATCGCTCTTGCCTCCAAAACGAACCCAAATACATGTCCCTCCTCTCTCCTCACCCTAACATTCTTCAGATCTTCGACGTCTTCCAACACGACCACTTTCTCTGCATCGTCCTCGAGCTCTGCCACCCCCACACCCTCCTCGACCGCATCCTCCCTCGCCCTTTCCCGGAGACCGAAGCCGCTTCTGTCATGAAGCAGCTCCTCGAAGCCCTCGCTCACTGCCACCGTCTCGGCATAGCCCACAGAGACATCAAGCCCGACAATCTCTTGTTTGATTCCGCTGATAATCTCAAGGTTGCCGACTTTGGGTCCGCACAGTGGTTCGGCGACGGAAGAAGCATGAGTGGAGTGGTCGGGACGCCTTACTATGTGGCGCCGGAGGTATTACTGGGAAGAGACTACAATGAGAAAGTAGATGTGTGGAGTAGCGGTGTCATTTTGTACATAATGTTATCCGGAGTTCCCCCCTTCCTCGGGGAATCGGCAGCCGATATATTTGAGGCTGTGGTCAGGGCCAATCTGAGATTCCCTCCCAGGACTTTCAGGTCCGTGTCTCCCTCTGCCAAGGATCTCCTTAGGAAGATGATCTGTAGGGATGTTTCACGGAGATTATCGGCGGAGCAGGCCTTGGGGCATCCGTGGATCCAGAGCGGAGGAGAGAAAAGGGATCTGACGTGA | 828 | 0.5459 | MEQILQNNHYQLCDEIGRGRFGTIFRCMHLLSGQLFACKLIDKRLLSDPTDRSCLQNEPKYMSLLSPHPNILQIFDVFQHDHFLCIVLELCHPHTLLDRILPRPFPETEAASVMKQLLEALAHCHRLGIAHRDIKPDNLLFDSADNLKVADFGSAQWFGDGRSMSGVVGTPYYVAPEVLLGRDYNEKVDVWSSGVILYIMLSGVPPFLGESAADIFEAVVRANLRFPPRTFRSVSPSAKDLLRKMICRDVSRRLSAEQALGHPWIQSGGEKRDLT | 275 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco02g0053 | 275 | PIRSF | ILK | 2 | 258 | - | - | |
| Acco02g0053 | 275 | Gene3D | Phosphorylase Kinase; domain 1 | 2 | 92 | - | - | |
| Acco02g0053 | 275 | ProSiteProfiles | Protein kinase domain profile. | 10 | 265 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco02g0053 | 275 | SMART | serkin_6 | 10 | 265 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco02g0053 | 275 | Pfam | Protein kinase domain | 10 | 265 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco02g0053 | 275 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 5 | 270 | - | - | |
| Acco02g0053 | 275 | CDD | STKc_CAMK | 9 | 264 | - | - | |
| Acco02g0053 | 275 | FunFam | Phosphoenolpyruvate carboxylase kinase 2 | 1 | 275 | - | - | |
| Acco02g0053 | 275 | ProSitePatterns | Protein kinases ATP-binding region signature. | 16 | 39 | IPR017441 | GO:0005524 | |
| Acco02g0053 | 275 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 267 | IPR011009 | - | |
| Acco02g0053 | 275 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 129 | 141 | IPR008271 | GO:0004672|GO:0006468 | |
| Acco02g0053 | 275 | Gene3D | Transferase(Phosphotransferase) domain 1 | 94 | 274 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco02g0053 | Acco-ChrAcco02 | 498864 | 499874 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco02g0053 | 10 | 273 | EF-hand Containing Proteins | AT1G50700 | 41.791 | 1.90e-74 | 233 |
Transcription factors information