Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0048 ATGCGTGTATTCATATGGTTTATGCAACTGCACTTACATGCCGCTGTGACGGGGCACTGTGAAGTAGCCGAGAATAAGACTCCTATCCCAAAACGATCGCCTCCTTTTTAGTACTCGATTCTGCCTTCGTCTCATTTTCCCCTCACTCTGAACCTCTCTCTACGAGTCTTAGTATAGCCCATTGTGATCATCATAATGTCAAACCCAAAGGTGTTCTTTGACATATTAATTGGAAAGATGAAAGCAGGTCGAATAGTGATGGAGTTATTTGCAGATGTCACCCCAAAGACAGCTGAAAACTTCCGAGCTCTCTGCACTGGTGAAAAGGGGATCGGCGCATCTGGGAAGCCTTTACATTACAAAGGGTCCGCATTTCACCGAATTATTCCGCAATTCATGTGTCAGGGAGGCGATTTCACTAGAGGGAATGGAACTGGTGGGGAATCAATTTACGGCTCAAAATTTGCCGACGAGAATTTCAAGCTGAAGCATACAGGGCCTGGTGTTCTCTCAATGGCAAATGCTGGTCCCAATACAAATGGTTCTCAGTTTTTTATATGCACTTCGAAGACTGAATGGCTTAATGGAAAGCATGTTGTATTTGGGAAAGTTGTTGATGGCTACGGTGTAGTTAATGAAATGGAGAAAGTGGGTTCACAGAGTGGGACCACCTCAGAACCAGTTGTAATTGAAGATTCTGGTCAGCTAGCGGACAACTGA 720 0.4458 MRVFIWFMQLHLHAAVTGHCEVAENKTPIPKRSPPFXYSILPSSHFPLTLNLSLRVLVXPIVIIIMSNPKVFFDILIGKMKAGRIVMELFADVTPKTAENFRALCTGEKGIGASGKPLHYKGSAFHRIIPQFMCQGGDFTRGNGTGGESIYGSKFADENFKLKHTGPGVLSMANAGPNTNGSQFFICTSKTEWLNGKHVVFGKVVDGYGVVNEMEKVGSQSGTTSEPVVIEDSGQLADN 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0048 239 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 89 104 IPR002130 GO:0000413|GO:0003755
Acco02g0048 239 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 125 137 IPR002130 GO:0000413|GO:0003755
Acco02g0048 239 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 183 195 IPR002130 GO:0000413|GO:0003755
Acco02g0048 239 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 168 183 IPR002130 GO:0000413|GO:0003755
Acco02g0048 239 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 196 211 IPR002130 GO:0000413|GO:0003755
Acco02g0048 239 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 79 232 IPR002130 GO:0000413|GO:0003755
Acco02g0048 239 FunFam Peptidyl-prolyl cis-trans isomerase 65 237 - -
Acco02g0048 239 SUPERFAMILY Cyclophilin-like 59 236 IPR029000 -
Acco02g0048 239 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 120 137 IPR020892 GO:0003755|GO:0006457
Acco02g0048 239 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 70 235 - -
Acco02g0048 239 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 72 235 IPR002130 GO:0000413|GO:0003755
Acco02g0048 239 CDD cyclophilin_ABH_like 69 234 - -
Acco02g0048 239 Gene3D - 65 239 IPR029000 -
Acco02g0048 239 MobiDBLite consensus disorder prediction 219 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0048 Acco-ChrAcco02 477817 480122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0048 83 217 U-box Gene Family AT5G67530 51.471 3.28e-32 121