Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0046 ATGGAACCCAATGACCCCCAGCTCAGCTCCTACTTCCACCACCAGCAACAGCAGACCGCCACCTCCGCCGCCGCCGCCGCCGCCGCCGCCCCCACCACCTCCTCCCCCACCAATGGCCTCTTACCCACCACTGACCCCTCCCACATGGTCTTCCCTCATTCCGTGCCCTCTGCCGTCTCCTCTCAATTAGAACCCCTAAAGAGGAAGAGGGGCAGGCCCAGGAAGTATGGCACCCCCGAGCAAGCTCTCGCCGCAAAGAAAGCTTCTACCTCCTCCTCTCACTCTTTCAACAAGGATAAAAAGGGCCACGCTTTGGGTAGTCCCTCTGCTTCCTCTTCGCACATAGGCCCCTCCAAGAAATCCCAGTTGTCTTCTCTAGGTCAAGGCTTTACCCCACATGTCATTACTGTTGCTGCTGGTGAGGATGTTGGCCAAAAAATTATGTTGTTCATGCAACAAAGTAGGCGGGAAATGTGCATCTTGTCTGCTTCTGGTTCCATCTCAAATGCTTCTCTTCGTCAGCCTGCAACCTCTGGAGGCAATATCGCATATGAGGGTCGATTTGAGATTATTTCACTTTCTGGCTCCTATGTCCGTACTGAACTTGGAGGGCGCACTGGTGGTCTTAGTGTATGCTTATCGAGTACTGATGGTCAAATCATAGGTGGAGGAGTTGGTGGACCCCTAAAAGCTGCTGGTCCAGTTCAGGTCATTGTTGGTACATTTTTTCTGGATGCCAAGAAGGATGCAGGAGCTAGTGCTGGTGTAAAAGGTGAAGCTCCTGGGAGCAAGCTGGCATCATTGGTTGGGGAACCGGTATCAAGTTTAGGTTACCAGCCGGGCATTGAATCGTCCAGTGGGAATCCAATTCATGGAAATGATGATGATCATCATGCTGTTGGAGGGAGTCATTTCATGATTCAACAACGCGGTGTGCATGTGACGCCTTCCCAGCCCACAGAGTGGTGGGCTCGTCCTGATTCCAGAAATGCTGGGTTTGAACAAATGACAGGAAAAACAGGCCATGGGGCTCACCAGTCTCCAGAGAATGGGGATTTTTTGACATGA 1068 0.5225 MEPNDPQLSSYFHHQQQQTATSAAAAAAAAPTTSSPTNGLLPTTDPSHMVFPHSVPSAVSSQLEPLKRKRGRPRKYGTPEQALAAKKASTSSSHSFNKDKKGHALGSPSASSSHIGPSKKSQLSSLGQGFTPHVITVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGGNIAYEGRFEIISLSGSYVRTELGGRTGGLSVCLSSTDGQIIGGGVGGPLKAAGPVQVIVGTFFLDAKKDAGASAGVKGEAPGSKLASLVGEPVSSLGYQPGIESSSGNPIHGNDDDHHAVGGSHFMIQQRGVHVTPSQPTEWWARPDSRNAGFEQMTGKTGHGAHQSPENGDFLT 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0046 355 MobiDBLite consensus disorder prediction 276 355 - -
Acco02g0046 355 ProSiteProfiles PPC domain profile profile. 127 262 IPR005175 -
Acco02g0046 355 Gene3D - 132 257 - -
Acco02g0046 355 MobiDBLite consensus disorder prediction 310 324 - -
Acco02g0046 355 Pfam Plants and Prokaryotes Conserved (PCC) domain 132 242 IPR005175 -
Acco02g0046 355 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 15 264 IPR039605 GO:0003680
Acco02g0046 355 MobiDBLite consensus disorder prediction 1 44 - -
Acco02g0046 355 CDD DUF296 131 242 IPR005175 -
Acco02g0046 355 MobiDBLite consensus disorder prediction 106 126 - -
Acco02g0046 355 MobiDBLite consensus disorder prediction 1 126 - -
Acco02g0046 355 SUPERFAMILY AF0104/ALDC/Ptd012-like 129 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0046 Acco-ChrAcco02 468950 473261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0046 50 353 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 54.740 1.07e-94 286