Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0032 ATGGCCCTGACGGCAATACTGGTGATCATGAGGTGCGTGTGGCAGAAGAAGCCTAGGCAAGCGGGGACGTTGAAGGAAATAACGACGTGGTCGGGGATGTACTGGTTCTCCAAGGCAGAGATAGAGAGTGCCATAAACCACTGGAACGAGAGGAAGTGCCTGGGAAGAGGGAGTGCGGGACAGGTGTTCAAAGGGGTTCTTCCCAGCGGGCAGGTGGTGGCCATCAAGCACCTCAACAAAACCAACAGCTCTGATACTTTCACCCGCGAAGTCGAAGGCCTTTCCAGGCTTCGCCATCCCAATCTCGTTTGCCTCTTTGGCTGTTGCATTGAAGATGGAGACAGATATTTAGTCTATGAGTACTGTGCTGGAGGCAATCTAGCCCAGCATCTCTTGAGAAGTGGGGCGCATTTGACGTGGGAAACAAGAGTTAGGATTTTAAGGGAGTGCTCCTTCGCTCTCAAGTATCTGCACCATCATATTGAGGGCTGCGTTGTCCATAGAGATATCAAGAGTTTGCAAGCTAAACTGTCGGATTTTGGGCTGGCGAAGATGTTGGGGATGGAAGAGAGCAAAGTGTTCACAGATGTAAGAGGGACCATAGGGTATATGGATCCAGAGTACATGAGCAATGCCAAGTTAACATGTGCCAGTGACGTCTACAGTTTTGGAATAGTCGTCCTGCAAATTCTATCGGGTCAGAAGGTGATAGAGTTAGATCTTGACGCCAGAGATCAGCTCACCAGGAAGGCGAAGGACGTGAGCATGGGAAAGCGGCCAGTATCGGATTTTGAAGACCCAAGGCTGAAGGGACAAGTAAACACGGCAGACTTTGAGGCCATCCTGAAAATTGCAGTTCTTTGTGTTGCCAAATTAAGCAGAGGCCGCCCCACCATTGAGGTTGTGTTCGAGGAATTGGATAAGGCCTATAAGAACACTCTCGCCCAATTGAAGGCAAAGCAGCATCATAGCGCATCCACCTCCATATCCTCCCATTTGATTGTTACATGA 1011 0.4975 MALTAILVIMRCVWQKKPRQAGTLKEITTWSGMYWFSKAEIESAINHWNERKCLGRGSAGQVFKGVLPSGQVVAIKHLNKTNSSDTFTREVEGLSRLRHPNLVCLFGCCIEDGDRYLVYEYCAGGNLAQHLLRSGAHLTWETRVRILRECSFALKYLHHHIEGCVVHRDIKSLQAKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMSNAKLTCASDVYSFGIVVLQILSGQKVIELDLDARDQLTRKAKDVSMGKRPVSDFEDPRLKGQVNTADFEAILKIAVLCVAKLSRGRPTIEVVFEELDKAYKNTLAQLKAKQHHSASTSISSHLIVT 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0032 336 FunFam Cysteine-rich receptor-like protein kinase 40 21 121 - -
Acco02g0032 336 FunFam probable receptor-like protein kinase At5g59700 122 325 - -
Acco02g0032 336 Gene3D Transferase(Phosphotransferase) domain 1 123 332 - -
Acco02g0032 336 SUPERFAMILY Protein kinase-like (PK-like) 31 313 IPR011009 -
Acco02g0032 336 ProSiteProfiles Protein kinase domain profile. 48 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0032 336 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 310 - -
Acco02g0032 336 Gene3D Phosphorylase Kinase; domain 1 20 121 - -
Acco02g0032 336 Pfam Protein kinase domain 50 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0032 Acco-ChrAcco02 354218 355728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0032 26 322 Receptor kinase-like Gene Family AT5G48740 38.125 2.94e-54 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Acco02g0032 Pkinase 2.8e-39 CL0016