Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0031 ATGAATTGTTTCTCGTGTTTCACTTCTCAGAGAAGTAAAAAAAACCTCGCCGCCGGACACCATGAATCTGCAACACAAGATCACGTCGCTTCAAAACCCCCGGATAATGGAACCCAAGGTCAGAGCCCAAATATTCAAGCGCAAGCATTCACCTTCCGCGAGCTAGCAACCGCCACCAAGAATTTCAGGCAGGAATGCCTGTTGGGTGAAGGTGGATTCGGAAGAGCGTACAAGGGCACCATTCCGGCAACCGGCAAGGTGGTGGCTGTGAAGCAATTGGACCGAAATGGGATGAATGGCAGCAAGGATTTTCTGACAGAGGTTGCAGTTTTGAGTCGCCTGAACCACGAAAATCTGGTGAATCTAGTTGGTTATTGTGCCGATGGGGATCAACGTCTTCTAGTCTATGAATACATGCCAGGGGGCTCTGTATATGATCGTCTTTTTGAGGTCGGGGAAGGCAAGTCTCCGTTGGATTGGTTCAACAGAATGAAAATAGCGTCGGGAGCAGCGAGAGGACTTGAGTATTTGCATGACAAGGCCAATCCACCAGTTGTTTACAGGGACTTGAAATCCTCCAACATCCTGCTGGATGGGAATCTTAACCCCAAACTATCTGATTTTGGGCTCAACAAGCTTTCCGGAGGAGACAGGACAAATCTTATATCCCCCGGAGTTACGGGTACTTATGGCTACTCGGCTCCCGAGTATATTAGGACCGGACACCTCACCTTGAAATCAGACGTCTACGGTTTTGGAGTTGTGCTGCTGGAGCTCATCACCGGCCGGCGAGCCATTGATACTACCAAACCCAATGAGGAGCAAAATTTAATTTCATGGGCACAGCCCTTGTTCAGAAATCCAAAACAATTCCCGGAAATGGCGGATCCGCTGCTGAAGAAGCATTTCCCGGAAAAGGATCTAAATCAAGCGGTAGCAGTAGCGGCCATGTGCCTCCAGGAGGAAGAAGGGGCGAGGCCTTTGATGAGTGACGTGGTAACTACTATGAGTTTCCTGTCCATGGTTCCACCGGAGGTTATTCAGGCACCGGTGTCGACTTCCACCTTGCCCCCGCAGGATGAGTGTTCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATTATTATGATGATTCTGAGGAGACGGAAGGAAGATCAAGCTGCAGAAGCAGCGGGAGTTGGGACGAGGAAAGCGTGACATCCAGCAAGAAATCGCGAAATTTGAGCCAGAAGAAAAGTAGCTCCATAAAGATTAGCAGTAGAAAATCAACGAGAAGCAGGAAGATGAGCACGGAATGGGAGGAAGGAGGAGGAGAGGGAATGCACGAGAGAGGGAGCAGCAGGATGTCTGAAAGAGATATATCGTTTGGGCTGACCAGCAGCGGGGAGATCATGCGCGGCGGCGGCAGTGACGACAGCAAAAGGGGGTTGCAGCACGCCCATACTACCAAACATCCCGCTTCCAAGGATCCTCATCCTCGCAGGGGACGACTCGCCGCTTCTAGCGCCAAAGTCTATTATTAA 1533 0.5095 MNCFSCFTSQRSKKNLAAGHHESATQDHVASKPPDNGTQGQSPNIQAQAFTFRELATATKNFRQECLLGEGGFGRAYKGTIPATGKVVAVKQLDRNGMNGSKDFLTEVAVLSRLNHENLVNLVGYCADGDQRLLVYEYMPGGSVYDRLFEVGEGKSPLDWFNRMKIASGAARGLEYLHDKANPPVVYRDLKSSNILLDGNLNPKLSDFGLNKLSGGDRTNLISPGVTGTYGYSAPEYIRTGHLTLKSDVYGFGVVLLELITGRRAIDTTKPNEEQNLISWAQPLFRNPKQFPEMADPLLKKHFPEKDLNQAVAVAAMCLQEEEGARPLMSDVVTTMSFLSMVPPEVIQAPVSTSTLPPQDECSEEEEEEEEEEEEEDYYDDSEETEGRSSCRSSGSWDEESVTSSKKSRNLSQKKSSSIKISSRKSTRSRKMSTEWEEGGGEGMHERGSSRMSERDISFGLTSSGEIMRGGGSDDSKRGLQHAHTTKHPASKDPHPRRGRLAASSAKVYY 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0031 510 MobiDBLite consensus disorder prediction 389 423 - -
Acco02g0031 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Acco02g0031 510 Coils Coil 365 385 - -
Acco02g0031 510 Pfam Protein kinase domain 64 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0031 510 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
Acco02g0031 510 PANTHER OS07G0668900 PROTEIN 3 343 - -
Acco02g0031 510 MobiDBLite consensus disorder prediction 349 510 - -
Acco02g0031 510 CDD STKc_IRAK 68 336 - -
Acco02g0031 510 SUPERFAMILY Protein kinase-like (PK-like) 48 367 IPR011009 -
Acco02g0031 510 Gene3D Transferase(Phosphotransferase) domain 1 139 343 - -
Acco02g0031 510 FunFam Serine/threonine-protein kinase PBS1 139 353 - -
Acco02g0031 510 ProSiteProfiles Protein kinase domain profile. 62 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0031 510 SMART serkin_6 62 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0031 510 MobiDBLite consensus disorder prediction 29 43 - -
Acco02g0031 510 MobiDBLite consensus disorder prediction 17 43 - -
Acco02g0031 510 Gene3D Phosphorylase Kinase; domain 1 35 138 - -
Acco02g0031 510 MobiDBLite consensus disorder prediction 360 383 - -
Acco02g0031 510 MobiDBLite consensus disorder prediction 471 500 - -
Acco02g0031 510 FunFam probable serine/threonine-protein kinase RLCKVII 35 138 - -
Acco02g0031 510 MobiDBLite consensus disorder prediction 428 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0031 Acco-ChrAcco02 348788 350707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0031 1 374 Glycoside Hydrolase AT3G07070 59.079 1.39e-159 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Acco02g0031 Pkinase 8.1e-46 CL0016