Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0016 ATGCCATCTGTTATTCCTTCGTCACCACGGAACAAAATGTTTAAATTCTTGAAAGAGGTGGTGGGTGGATCTGGAACCGGACTCAAAGATCTTCCTTATAATATCGGCCAACCTTACCCTTCTGCTTGGGGATCTTGGACTCACTACCGCGGCACCTCCAAGGATGATGGATCTCCAGTTTCAATCTTTTCTCTATCTGGGAGTAATGCTCAGGATGGACATTTAGCAGCAGGTCGAAATGGTGTCAAGCGTCTCCGAACAGTCAGGCATCCAAATATTTTGTCATTTCTTCACAGTACTGAGACTGAAACTTCTGATGGTGGTTCTGCCAAGGTCACGATCTATATTGTAACAGAGCCTGTTATGCCACTTTCAGAAAAGATTAAGGAGTTAGGACTAGAAGGTACGCAAAGGGACGAATATTATGCTTTGGGGCTGCATCAAATAGCCAAGGCTGTGAGCTTCTTAAATAATGATTGCAAACTTATTCATGGTAATGTTTGCTTGGCTAGTGTAGTGGTCACACAAACTTTGGACTGGAAACTCCATGCTTTTGACGTTCTTTCAGAATTTGATGGGAGCAATGAAGCTTCTACTGGGCAAATGCTGCAATATGCATGGCTTGTTGGATCACAATACAAATCAATGGAGTTGGCAAAGTCTGACTGGGCTGCTATCAGAAAGTCTCCTCCATGGGCCATTGATTCTTGGGGCATGGGATGTCTTATCTATGAGCTATTCTCGGGTGTCAGTTTGGGCAAAACAGAGGAGCTACGCAACACTGCCTCCATTCCCAAGTCTCTGCTTCCAGATTACCAGCGCCTGTTGAGTTCCATGCCATCTCGTAGATTAAATACATCAAAGCTGATAGAAAACAGTGAATATTTTCAAAATAAGTTGGTGGACACAATACATTTCATGGAGATTCTTAGCTTGAAAGACAGCGTTGAGAAAGACACCTTCTTTCGTAAGCTTCCAAATTTAGCGGAGCAACTACCTCGCCAGATTGTGTTGAAGAAGTTGCTACCTTTGTTAGCTTCTGCTCTTGAATTTGGTTCAGCTGTGGCCCCTGCTTTGACAGCATTGTTGAAAATGGGTTCCTGGCTGTCAGTTGAGGAGTTCAGTGTCAAGGTGCTTCCAACTGTTGTAAAACTCTTTGGCTCTAATGACCGAGCTATTCGAGTTGCGCTTCTTCAACATATTGATCAATTTGGTGAGTCCTTATCAGCGCAGGTTGTTGATGAGCAGGTTTACCCTCATGTTGCTACTGGGTTCTCTGACACATCTGCTTTTCTGAGGGAACTGACACTTAAGGCCATGCTTATATTAGCTCCTAAGCTGTCTCAAAGGACCATTTCAGGGTCATTATTGAAATACCTGTCCAAGTTACAGGTTGATGAAGAACCAGCAATTCGAACAAATACGACCATCTTGCTAGGAAATATTGCAAGCTACCTAAATGAAGGGACAAGAAAAAGAGTTTTGATTAATGCATTTACAGTCCGTGCTTTACGGGATACTTTCCCTCCTGCTAGAGGAGCAGGCATAATGGCTTTAAGTGCCACCAGCTCCTATTATGATATACCTGAAATTGCTACTCGGATACTTCCCAACGTTGTCGTGCTTACAATTGATCCCGACAGTGATGTTCGATCCAAAGCATTTCAAGCTGTTGATCAATTTTTGCAGATAGTGAAGCAATGCTATGACAAGTCAAATACAACAGATACTATAGGAGCCGTTGGCATGGGAATTTCATCAGCTCCAGGAAATGCGAGTTTGCTTGGATGGGCTATGAGCTCTTTGACCCTGAAGGGAAAACCTTCTGACCATGCTCCCGTTGCTTCTGCAAGTACCAGTGCACTTACACCACCATCTTCCAATGCCAGTTCAGCTGTGGATGCACCATCAACAGCACCAGTCCGTGTAAGATCTACCTCTGATTTGACCGAAATAGCCATCCCTGCATCCCCTACATCAACAGATGGTTGGGGAGAACTGGAGAATGGAATTGAAGAGCATGAAAATGACAAGGATGGTTGGGATGATTTGGAACCACTCGAAGAGCCAAAACCGTCTCAAGCTCTTGCAAGTATTCAAGCAGCTCAAAGGCGACCAGTCTCTCAAACTGTTTCACAGGCGAAACATGCCTCAATTATGCGACCAAAAAGTGCAACAAAGTTGAGCAAGGATGAAGATGATGATTTGTGGGGTTCCATTGCAGCGCCTGCTCCAAAAACATCAAAGCCTTCGGACGTCAAATCAGTTGCTACCAATGATGATGATCCCTGGGCTGCCATTGCTGCACCAGCACCCACCACTAAAGCGAAGCCCTTGTCAGCTAGCAGAGGTCGGGGGGTTAAACCTAGCGCTCCTAAATTAGGTGCTCAGAGAATAAACCGAACATCATCTGGGATGTAA 2421 0.4465 MPSVIPSSPRNKMFKFLKEVVGGSGTGLKDLPYNIGQPYPSAWGSWTHYRGTSKDDGSPVSIFSLSGSNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTETETSDGGSAKVTIYIVTEPVMPLSEKIKELGLEGTQRDEYYALGLHQIAKAVSFLNNDCKLIHGNVCLASVVVTQTLDWKLHAFDVLSEFDGSNEASTGQMLQYAWLVGSQYKSMELAKSDWAAIRKSPPWAIDSWGMGCLIYELFSGVSLGKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAVAPALTALLKMGSWLSVEEFSVKVLPTVVKLFGSNDRAIRVALLQHIDQFGESLSAQVVDEQVYPHVATGFSDTSAFLRELTLKAMLILAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASYLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALSATSSYYDIPEIATRILPNVVVLTIDPDSDVRSKAFQAVDQFLQIVKQCYDKSNTTDTIGAVGMGISSAPGNASLLGWAMSSLTLKGKPSDHAPVASASTSALTPPSSNASSAVDAPSTAPVRVRSTSDLTEIAIPASPTSTDGWGELENGIEEHENDKDGWDDLEPLEEPKPSQALASIQAAQRRPVSQTVSQAKHASIMRPKSATKLSKDEDDDLWGSIAAPAPKTSKPSDVKSVATNDDDPWAAIAAPAPTTKAKPLSASRGRGVKPSAPKLGAQRINRTSSGM 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0016 806 Gene3D Transferase(Phosphotransferase) domain 1 121 292 - -
Acco02g0016 806 Gene3D Phosphorylase Kinase; domain 1 24 119 - -
Acco02g0016 806 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 21 785 - -
Acco02g0016 806 ProSiteProfiles Protein kinase domain profile. 14 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0016 806 MobiDBLite consensus disorder prediction 696 719 - -
Acco02g0016 806 MobiDBLite consensus disorder prediction 613 657 - -
Acco02g0016 806 Gene3D - 294 570 IPR011989 -
Acco02g0016 806 MobiDBLite consensus disorder prediction 667 689 - -
Acco02g0016 806 SUPERFAMILY Protein kinase-like (PK-like) 46 299 IPR011009 -
Acco02g0016 806 ProSiteProfiles HEAT repeat profile. 378 416 IPR021133 -
Acco02g0016 806 Pfam Protein kinase domain 49 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0016 806 SMART serkin_6 49 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0016 806 MobiDBLite consensus disorder prediction 608 806 - -
Acco02g0016 806 ProSiteProfiles HEAT repeat profile. 535 573 IPR021133 -
Acco02g0016 806 SUPERFAMILY ARM repeat 305 567 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0016 Acco-ChrAcco02 232771 244382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0016 82 303 MAP Kinase Kinase Kinase AT5G66850 26.556 1.61e-06 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Acco02g0016 Pkinase 4e-08 CL0016