Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0004 ATGAGAGAATCGACGTTAGGGAAGAAGGAAAAAAGGAAGAAGGAGGAGGAAGAAATAATGTGCGGCATATTTGCTTATCTTAACTATAACGTCAACAAAGAAAGGAGGTACATCCTGCAGGTACTATTCAATGGGCTCAGGCGATTGGAATATCGCGGCTATGATTCTGCTGGCATCGCCATCGACTCCTCACCTGCACTCGATCCAAACACTCCTCTTATCTTTCGTCAAGAGGGCAACATTGAATCCCTTGTCAAATCCGTCTACCAAGAAGTTGCTGAAGTGGAATTAAATTTGGAGGAATCTTTCCCCACCCATGCTGGAATCGCGCATACACGATGGGCAACACACGGAGAGCCTTCTCCAAGGAATAGTCATCCTCAGAGCTCTTGCGCAGGAGATGAATTTTTGGTTGTTCACAATGGGGTTATTACTAATTACGAGGTTTTGAAGGAAACATTGATCCGGCACGGGTTCACATTTGAATCTGAAACTGACACAGAAGTCATTCCAAAACTTGCAAAGTTTGTTTTCGATAAAGCAAATGAGGCAGAAGGCGACCAAGTTGTTACCTTCAGTCAAGTTGTTCTGGAAGTTATGAGGCATCTGGATGGAGCATATGCCCTTATTTTCAAAAGCCGACATTATCCAAATGAGTTAATTGCTTGCAAGCGTGGCAGCCCACTACTCATTGGTGTAAAAGAATTGAGAGAAAATATGGTTGCTGGCTCAGCATTTGAGGATAGTAACTCTCTATCAAAAAATGGCCACCCCCAAGAGTTCTTTATATCTAGTGATGCTAATGCCGTGGTAGAACATACAAATAGGTATTTGGAGATCCGGGACGGTGAAGTTGTTCACCTCAAGGATGGTGGAGTTTCAATTATGAAGTTTGAAAATGATAAAGGAAAAAATGGTAGTTCCCATTATAGGCCTGCTTCAGTGCAACGGGCTTTATCAGTTCTTGAGATGGAGGTTGAGCAAATTAATAAAGGACATTATGAGCATTACATGCAGAAAGAAATTCATGAGCAACCTGAATCTCTTACAACCACCATGAGGGGGAGGCTTAGTCGGGGAGGATCGAGTAAATTAAAAACTGTGCTGTTGGGTGGATTGAAGGATCACCTTAAAACGATCCGAAGAAGTAGAAGGATTGTTTTCATCGGTTGTGGTACTAGTTACAATGCAGCTTTGGCATCTAGGCCAATATTGGAAGAACTTACTGGAATACCTGTTACCATGGAAATCGCTAGTGATCTATTGGATCGGCAAGGACCAATATACAGAGAAGATACTGCTGTTTTTGTTAGTCAATCCGGTGAAACTGCTGATACTTTACTTGCACTGCAATATGCTTTAGACAATGGTGCATTATGTGTTGGCATAACAAATACCGTTGGTAGTGCAATAGCAAGGAATACACATTGTGGTGTACATATAAATGCTGGTGCTGAGATAGGTGTGGCAAGTACCAAGGCTTACACAAGTCAAATAGTAGTGATGGCCATGTTGGCACTTGCTATAGGAGGTGACACAATTTCTAATCAAGCCAGGAGAGAAGCAATTATCGATGGTCTCTTGGACCTGCCAAATAAAGTCAGGGAGGTGCTGAAGCAAGACCAGGAGATGAAGGATCTGGCGAAGCTTTTAATGTCTGAACAGTCTCTTCTTGTCTTTGGAAGAGGATTCAACTATGCAACAGCTCTGGAGGGTGCTTTGAAAGTAAAGGAAGTGGCTCTTACGCACAGTGAAGGAATACTTGCTGGTGAAATGAAGCATGGTCCTTTGGCCTTGGTGGATGAAAATCTTCCAATTATTGTTTTAGCTACTCGTGATGCTTGCTTCAGCAAGCAGCAGTCTGTCATTCGGCAACTTCATGCTCGCAAGGGCCGTCTTATAGTTATGTGTTCAAAAGGGGATGCTGCTTTGGTGTCTACTGGTGAATCTTGTAGGGTAATTGAAGTTCCACTTGTTGAAGACTGTCTACAACCTGTAATTAATATAATTCCATTACAGTTACTGGCATATCATCTGACTGTACTTAAGGGATTAAATGTTGACCAGCCTCGAAATCTCGCCAAGAGTGTCACAACCCAATGA 2103 0.4261 MRESTLGKKEKRKKEEEEIMCGIFAYLNYNVNKERRYILQVLFNGLRRLEYRGYDSAGIAIDSSPALDPNTPLIFRQEGNIESLVKSVYQEVAEVELNLEESFPTHAGIAHTRWATHGEPSPRNSHPQSSCAGDEFLVVHNGVITNYEVLKETLIRHGFTFESETDTEVIPKLAKFVFDKANEAEGDQVVTFSQVVLEVMRHLDGAYALIFKSRHYPNELIACKRGSPLLIGVKELRENMVAGSAFEDSNSLSKNGHPQEFFISSDANAVVEHTNRYLEIRDGEVVHLKDGGVSIMKFENDKGKNGSSHYRPASVQRALSVLEMEVEQINKGHYEHYMQKEIHEQPESLTTTMRGRLSRGGSSKLKTVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALASRPILEELTGIPVTMEIASDLLDRQGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISNQARREAIIDGLLDLPNKVREVLKQDQEMKDLAKLLMSEQSLLVFGRGFNYATALEGALKVKEVALTHSEGILAGEMKHGPLALVDENLPIIVLATRDACFSKQQSVIRQLHARKGRLIVMCSKGDAALVSTGESCRVIEVPLVEDCLQPVINIIPLQLLAYHLTVLKGLNVDQPRNLAKSVTTQ 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0004 700 Gene3D - 332 699 - -
Acco02g0004 700 ProSiteProfiles SIS domain profile. 547 690 IPR001347 GO:0097367|GO:1901135
Acco02g0004 700 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 21 291 IPR017932 -
Acco02g0004 700 ProSiteProfiles SIS domain profile. 376 515 IPR001347 GO:0097367|GO:1901135
Acco02g0004 700 Pfam Glutamine amidotransferase domain 104 223 - -
Acco02g0004 700 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 21 297 IPR029055 -
Acco02g0004 700 NCBIfam glutamine--fructose-6-phosphate transaminase (isomerizing) 21 698 IPR005855 GO:0004360|GO:1901137
Acco02g0004 700 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 21 310 IPR029055 -
Acco02g0004 700 CDD SIS_GlmS_GlmD_1 385 510 IPR035466 -
Acco02g0004 700 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 20 700 - -
Acco02g0004 700 Gene3D - 536 685 - -
Acco02g0004 700 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 21 311 - -
Acco02g0004 700 CDD SIS_GlmS_GlmD_2 542 698 IPR035490 -
Acco02g0004 700 CDD GFAT 21 288 IPR047084 -
Acco02g0004 700 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 332 606 - -
Acco02g0004 700 SUPERFAMILY SIS domain 331 699 IPR046348 GO:0097367|GO:1901135
Acco02g0004 700 Pfam SIS domain 380 507 IPR001347 GO:0097367|GO:1901135
Acco02g0004 700 Pfam SIS domain 551 682 IPR001347 GO:0097367|GO:1901135
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0004 Acco-ChrAcco02 129434 136249 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0004 45 232 PRT Gene Family AT4G38880 28.125 1.43e-08 55.8