Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3951 ATGGGCCATAGTTCAAGGAAGAAGAAGCGTGGAGGAGGTAGTGCAAGGAGAATTAAGGGAAGAACACCCCTAAAAGATCATGCATCTCAAGTTAGTGGGGATGATAATGAACTATCGGAAGAAATCACCGCTTTATGTGCAATTTTCCAAGACGACTGCAAGATTCTTCCTGGATCACCTCCTCAGATAGTTATTAAGCTCAGACCCTATTCAAAGGACATGGGATATGAGGATGTAGATGTTTCTGCTGTTCTCGTTGTTAGGTGCTTACCTGGCTATCCTTTAAAGTGTCCAAAGTTGCAAATTACTCCTGAGAAGGGTTTATCAGAAAGTGATGCTGATAAACTTTTGTCTCTCCTCCATGATCAGGCTATCCTGAATGCCAGGGAGGGAAGAGTAATGATCTTTAATTTGGTGGAGGCTGCTCAAGAGTTTATGTCTGGTATTGAGCCAGCTAGCAAATCAAATGACTCTAATTTGCGCTCAACTGTGGAAAGTAATGAAGACTTGTTGCTCAAGGATATAGCAACTTCAAGTAGAAGTTCTTTTGTTTATGGTTTCATAGACCTCTTTAGTGGCTATGGAGAATCATGGAATTGGGGCTTTGGAATGGATGAAACTAGCGGTAACATTTCTCCAGTCCCACCCTCGAAGTTAGATGCTGCAGAACATGCTTATAGGACTGAGGAAAATAAATCAGATAGAACTTCAGAATCACCTAAAATGCAAGAAACAAAGCAAGGCCCATTAGTTTCTCCAACTGCCAAATTAGACGCCTTGGGGGAAAATGGTGAAGAAAGCAACAAGAGCATGCCTTCATCAAATTCAAGTAGTTCTGATGCAGTGGAGCCCATAGGGAATGGCAATGAAAATGAGAAAGAGCATGATTTTATCCTTCATGAGTCTTCATCAGAGGATAATGAAGAAGTTATTTATGCAACTGCGTCTTCAGAGTCCCAGTCTTCTGCATTCATCGCTCATCATCAAGAACCTCAAACAGATGAAAGGGATCTGATAATGGTTCACTTGCTTCGCCTTGCATGTTCCTCAAAAAGTCCTTTGGCTAACTCTTTGCCGCAAATAGCCACAGAGCTGTACCATTTAGGGGTCATTTCTGATTGGGCAAGGGATAAGGCATCTGAACCACCTTCTTATTTTAACAAAACCTTTGATCAAGTCTTCCAGAAACACCTGGTATCATCCAAAATATCACAGTTTTGGAAACCTTCTGATCTTGGAGGCCCACCTATGGTCCCCACAAGTTCTCGATATCTGAATGACTTTGAGGAGCTACATCCTCTTGGTCATGGTGGTTTTGGTCATGTTGTGTTGTGCAGAAACAAACTTGATGGTAGGCAGTATGCAGTAAAGAAAATTCGCCTTAATGACAAAAGCATGCCTGTAAATGATAGGATTTTAAGGGAGGTGGCAACTCTTTCCCGTCTGCAACATCATCATGTTGTTAGGTATTATCAGGCATGGTTTGAAACTGGTATTGCTGATTCTTACGCTGATGCTATGTGGGGTTCAAGGACTCCATTGAGCTCCACCTTCAGCTTTAAAGCTGCAAGGTCCCATGAGGCTCTTGGACATGAGAATCAGCTCGAATCAACTTTCCTTTACATTCAAATGGAGTACTGCCCCGAGACCCTCCGACAGGTATTTGAGTCTTGCACTCATTTCGACAAAGAGCTGGCATGGCATTTGTTCCGTCAAATACTAGAAGGCTTGGAACACATACATGGACAGGGAATAATTCATCGGGATTTGACTCCAAATAACATATTTTTTGATTCTCGAAGAGATATCAAAATTGGTGATTTTGGTCTTGCCAAGTTTTTGAAGTTGGAGCAATTGGATCAAGATCTTGGATATCCAGCTGATATAAATGGAATTTCCGTTGATGGCACTGGACAAATTGGCACCTATTTCTATACAGCTCCTGAAATTGAGCAAAGATGGCCTAAGATTGATGAAAAGGCTGATATGTACAGCTTGGGGGTAGTTTTCTTTGAACTTTGGTACCCGTTTGCAACAGCAATGGAGAGACATATTGTATTATCTGATCTGAAGCAGAAAGGAGAACTACCTTCTCCATGGGTTGCTGAGTTTCCAGAACAGGAAGCCTTGGTCCGGCACCTAATGTCTCCAAGTCCAAGTGATCGTCCTTCTGCCACAGAACTTTTACAGCATGTATTTCCTCCTCGAAAGGAGTCTGAGTTGTTAGATGATATTTTACAAACAATGCAGACATCTGAGGATAGAAGGATATATGATAAAATTGTGAATGCTATCTTTGATAAAGAGATGCTAAGAGCAAAAGAAAACATCCATGCGGCTGGTAGATTGGTGCGAGTTGGAGATAATAATTCATCCATTCAATACACAGAAATAGAAACTGAGGTCCGTGATTACGTTGTAGATGTCACAAGAGAAGTATTCAGGCAGCATTGTGCAAAGCGCCTGGAAATATTAACAATGCGATTATTGGATGATTTTCCAGAGTATAATAGAAATGCAGTCAAACTTTTGACCAATGGAGGAGACATGCTTGATCTTTGTTATGAGCTGCGTTTTCCTTTTGTAAACTGGATTGTATCTAACCAGAAATCTTCTTTCAAACGATATGAGATATCAAGTGTCTACAGAAGAGCAGTTGGACGTTCATCACCAAACCGGTACCTTCAGGGTGATTTTGACATAATTGGTGGTGCATCAGCATTGACAGAGGCAGAGGTCTTAAAGGTGACCAGGGATATAGTCACTTATATTTTTCCTGCAGACGCATGTGACATTCATATAAATCATGGTGATCTACTGGATGCAATTTGGTCATGGATAGGTGTTAAGGATGAGCACAGACTTAAAGTGGCAGAGCTTCTTGCAATGATGGGTTCTCTGCGTCCACAATCCTCAGTAAGGAAATCAAAATGGGCAGTCATACGCAGGCAGCTTTTGCAGGAACTGAATTTAGCAGAAGCTATTGTAAATAGGTTACAGACAGTAGGTTTAAGATTCTGTGGAGCCGCAGATAAGGCCCTTCCTAGACTAAGAGGAGCCCTTCCTCCTGATAAACGTACACGCAAGGCACTTGAAGAATTGTCTGAGCTCTGCAGTCTCTTGGGAGTTTGGAGGATTGACAACAATGTTTTTATAGATGCTTTAATGTCCCCAACTGAAATTTATCACCGAGGTTTTTTTTTCCAGGTATACATAACAAAGGAGAATAATCCTGGATCACTCCCAGAAGGTGCCTTGCTGGCTGTTGGTGGTTGCTATGACTATCTGCTTCATCAGATGTGGATCCGTCACTATAAAGCACATCCTCCCAGTGGTGTAGGAGCCAGCCTTGCACTAGAGACAATAATTCTGAACTGTCCAGTAGATTTTAAGCCCATTAAAAATGAAGCCAGCACCAATATTCTTGTTTGTTCAAGAGGAGGTGGTGGTCTGCTAACAGAGCGTATGGAACTGGTGGCTGAATTATGGGAGAAAGACTTTAAGGCTGAATTTGTTCCCACCCCTGATCCAAGTCTCACAGAGCAGTATGAGTACGCCAATGAACATGATATCAAATGTCTTGTTATCATAGCAGATCAGACCGATTCTGTAAAGGTTCGCCACCTCGAACTCAAGAAGGAAAAGAAAGTTGAGAGAGAAAATCTAGTCACGTTTTTATCAAATGCTATGGCAACACAATTTAGAAACCCCTTCATTTGGAACTGA 3726 0.4176 MGHSSRKKKRGGGSARRIKGRTPLKDHASQVSGDDNELSEEITALCAIFQDDCKILPGSPPQIVIKLRPYSKDMGYEDVDVSAVLVVRCLPGYPLKCPKLQITPEKGLSESDADKLLSLLHDQAILNAREGRVMIFNLVEAAQEFMSGIEPASKSNDSNLRSTVESNEDLLLKDIATSSRSSFVYGFIDLFSGYGESWNWGFGMDETSGNISPVPPSKLDAAEHAYRTEENKSDRTSESPKMQETKQGPLVSPTAKLDALGENGEESNKSMPSSNSSSSDAVEPIGNGNENEKEHDFILHESSSEDNEEVIYATASSESQSSAFIAHHQEPQTDERDLIMVHLLRLACSSKSPLANSLPQIATELYHLGVISDWARDKASEPPSYFNKTFDQVFQKHLVSSKISQFWKPSDLGGPPMVPTSSRYLNDFEELHPLGHGGFGHVVLCRNKLDGRQYAVKKIRLNDKSMPVNDRILREVATLSRLQHHHVVRYYQAWFETGIADSYADAMWGSRTPLSSTFSFKAARSHEALGHENQLESTFLYIQMEYCPETLRQVFESCTHFDKELAWHLFRQILEGLEHIHGQGIIHRDLTPNNIFFDSRRDIKIGDFGLAKFLKLEQLDQDLGYPADINGISVDGTGQIGTYFYTAPEIEQRWPKIDEKADMYSLGVVFFELWYPFATAMERHIVLSDLKQKGELPSPWVAEFPEQEALVRHLMSPSPSDRPSATELLQHVFPPRKESELLDDILQTMQTSEDRRIYDKIVNAIFDKEMLRAKENIHAAGRLVRVGDNNSSIQYTEIETEVRDYVVDVTREVFRQHCAKRLEILTMRLLDDFPEYNRNAVKLLTNGGDMLDLCYELRFPFVNWIVSNQKSSFKRYEISSVYRRAVGRSSPNRYLQGDFDIIGGASALTEAEVLKVTRDIVTYIFPADACDIHINHGDLLDAIWSWIGVKDEHRLKVAELLAMMGSLRPQSSVRKSKWAVIRRQLLQELNLAEAIVNRLQTVGLRFCGAADKALPRLRGALPPDKRTRKALEELSELCSLLGVWRIDNNVFIDALMSPTEIYHRGFFFQVYITKENNPGSLPEGALLAVGGCYDYLLHQMWIRHYKAHPPSGVGASLALETIILNCPVDFKPIKNEASTNILVCSRGGGGLLTERMELVAELWEKDFKAEFVPTPDPSLTEQYEYANEHDIKCLVIIADQTDSVKVRHLELKKEKKVERENLVTFLSNAMATQFRNPFIWN 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3951 1241 SUPERFAMILY Class II aaRS and biotin synthetases 796 1123 IPR045864 -
Acco01g3951 1241 SUPERFAMILY UBC-like 36 146 IPR016135 -
Acco01g3951 1241 CDD STKc_EIF2AK4_GCN2_rpt2 421 731 - -
Acco01g3951 1241 MobiDBLite consensus disorder prediction 19 34 - -
Acco01g3951 1241 SUPERFAMILY Class II aaRS ABD-related 1140 1231 - -
Acco01g3951 1241 Pfam Anticodon binding domain of tRNAs 1140 1233 IPR024435 -
Acco01g3951 1241 FunFam eIF-2-alpha kinase GCN2 550 743 - -
Acco01g3951 1241 Pfam Protein kinase domain 428 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3951 1241 FunFam Histidine--tRNA ligase, cytoplasmic 1136 1231 - -
Acco01g3951 1241 SMART RWD2001b 40 149 IPR006575 GO:0005515
Acco01g3951 1241 Gene3D Bira Bifunctional Protein; Domain 2 793 1128 IPR045864 -
Acco01g3951 1241 MobiDBLite consensus disorder prediction 1 16 - -
Acco01g3951 1241 Gene3D Phosphorylase Kinase; domain 1 417 546 - -
Acco01g3951 1241 FunFam eIF-2-alpha kinase GCN2 417 546 - -
Acco01g3951 1241 FunFam eIF-2-alpha kinase GCN2 28 156 - -
Acco01g3951 1241 ProSiteProfiles Protein kinase domain profile. 428 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3951 1241 Coils Coil 982 1002 - -
Acco01g3951 1241 PANTHER HISTIDYL-TRNA SYNTHETASE 776 1235 - -
Acco01g3951 1241 FunFam eIF-2-alpha kinase GCN2 793 1129 - -
Acco01g3951 1241 MobiDBLite consensus disorder prediction 225 291 - -
Acco01g3951 1241 Pfam Histidyl-tRNA synthetase 884 1122 IPR041715 -
Acco01g3951 1241 Gene3D Ubiquitin Conjugating Enzyme 28 158 IPR016135 -
Acco01g3951 1241 ProSiteProfiles RWD domain profile. 40 149 IPR006575 GO:0005515
Acco01g3951 1241 MobiDBLite consensus disorder prediction 266 285 - -
Acco01g3951 1241 Gene3D Transferase(Phosphotransferase) domain 1 549 740 - -
Acco01g3951 1241 ProSitePatterns Protein kinases ATP-binding region signature. 434 458 IPR017441 GO:0005524
Acco01g3951 1241 MobiDBLite consensus disorder prediction 225 241 - -
Acco01g3951 1241 SUPERFAMILY Protein kinase-like (PK-like) 424 735 IPR011009 -
Acco01g3951 1241 ProSitePatterns Tyrosine protein kinases specific active-site signature. 585 597 IPR008266 GO:0004672|GO:0006468
Acco01g3951 1241 Gene3D - 1136 1232 IPR036621 -
Acco01g3951 1241 Pfam RWD domain 37 145 IPR006575 GO:0005515
Acco01g3951 1241 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3951 Acco-ChrAcco01 54829642 54871039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3951 434 731 CBL-interacting serine-threonine protein kinases AT5G45820 26.403 4.03e-19 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Acco01g3951 Pkinase 7.7e-50 CL0016