Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3924 ATGGAGCAGATGAATTCGGGCCTCACACGTTACCGATCGGCGCCCAGTTCCTATTTCACCAATATAATCGACAAGGAGTGCTATGAGCACATATTCAATCGACCCTCTAGCCCCGAAACCGAGCGAGTTTTTTCGCGCCTAATCAGTAGTTTTGCTGAGGACCCCCCGCCTCAAAGTCTCGCGTCCCTTACTGTGAAGCAAGAGGACAACCAGAACCATCAGACTCAGCCTATGCCATCCGTCAACAATGAACCGGCGCTTCCGCGGCGGCAGCAGGACAACATGAGTATTTACGACAGTGCTCCTCGTAATGTATCCACGAGCTCAGCGCGCCCCCCTCTGCCAAATCAGACCCATCCCTCGGCTAATCGGTTGCCTCCTATGAAGACTGGACTTGGAAATACTACTTGCAATCTTACCCGGCATAATAGCTCCCCTCCAGGTCTCTTTGCTAACTTCAACATTGATCCTGGCTGTGCTGCGGCTCTGAGAGGCGTGGAAACTTTTGCTGCTGCGGATAACGCTGCCGAAGCCACAGGCTTTCCTTCCGCAGGGACGTTGAACAACCGACCGGCTTACTCGTCGGGGTTAATGTTATCCGTAGCTGAGACCAGAGTTAAAAACAACATAGAATTAGATAATCCCCAGAATGAGGCCTTTAGTGAAAGCCTGGACAATGATTTTATCTCAGGTTTCCCTGTAGATCCTTGGGACGACTCTGCAATTATGTCTGACAATATTAGTGGTAAAAAAAGATACAGAGATGAAGAGAATGAAGCAAAACCATTTTCTGGTTTAAGTGCGGCTGAAGCCGAGAATGAGAGGGGAGGCCAGGCCAGTGGCCCTCCTCCATTGACTCATCACTTGAGTTTGCCGAAAACTGCAATGGAGATGGCAGCCATTGAGAAGTTATTGCAGTACTCAGATTCTGTTCCCTGCAAAATTCGTGCCAAGCGAGGCTGTGCCACTCACCCCCGAAGCATTGCAGAGCGGGTTAGAAGAACTAAAATTAGTGAGCGCATGAGGAAACTACAAGATCTGGTTCCCAACATGGACAAGCAAACAAACACGGCAGACATGTTGGACTTAGCTGTCGACTACATTAAAGACCTTCAAAAGCAGGTTCAGACACTTTCAGACAGCCGATCTAGATGTACGTGTTTGCCGGGGCAGCGTCAATAG 1182 0.4958 MEQMNSGLTRYRSAPSSYFTNIIDKECYEHIFNRPSSPETERVFSRLISSFAEDPPPQSLASLTVKQEDNQNHQTQPMPSVNNEPALPRRQQDNMSIYDSAPRNVSTSSARPPLPNQTHPSANRLPPMKTGLGNTTCNLTRHNSSPPGLFANFNIDPGCAAALRGVETFAAADNAAEATGFPSAGTLNNRPAYSSGLMLSVAETRVKNNIELDNPQNEAFSESLDNDFISGFPVDPWDDSAIMSDNISGKKRYRDEENEAKPFSGLSAAEAENERGGQASGPPPLTHHLSLPKTAMEMAAIEKLLQYSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVQTLSDSRSRCTCLPGQRQ 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3924 393 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 324 386 IPR036638 GO:0046983
Acco01g3924 393 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 15 385 - -
Acco01g3924 393 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 321 371 IPR011598 GO:0046983
Acco01g3924 393 MobiDBLite consensus disorder prediction 99 129 - -
Acco01g3924 393 FunFam Transcription factor bHLH130 family 322 391 - -
Acco01g3924 393 Pfam Helix-loop-helix DNA-binding domain 326 372 IPR011598 GO:0046983
Acco01g3924 393 SMART finulus 327 377 IPR011598 GO:0046983
Acco01g3924 393 Gene3D - 322 387 IPR036638 GO:0046983
Acco01g3924 393 MobiDBLite consensus disorder prediction 253 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3924 Acco-ChrAcco01 54639459 54641370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3924 5 387 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 39.109 9.59e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco01g3924 HLH 5e-10 No_clan