Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3922 ATGAAACAACATCCGTGTCTCGACGCATCTTTCCTTCACCATCAGAGCGAGGGAAGGAGAGATATGGAATCGGCAACTCCACCGTCGCCGGAGCTGAAACTCGACCATCTAAGGGCGCTCAAGGTGGTCGGCAAGGGTGCCATGGGGACGGTCTTCCTCGTCTACGACATGGTAGCGGATCCTTATGCTCGCAGCCCCTTCGCCCTGAAGGTCGTCGAGAAATCCTCCATCCAGAACAAGCTCGACGCCGACCGTCGAGCCAGGTGGGAAATCCATGTCCTCTCTCGCTTGGCCCACCCATTTCTTCCTCCCCTCTTAGGGACATTTGAGAACCATCAATTGTTGGCCTGGGCCACCCCCTATTGTCCGGGAGGCGACCTCAACGTCCTTCGTTACCGTCAAACTGATAGGGTCTTCGCCCCTGCCGTCATTCGCTTCTATTTGGCCGAGATCATCTGCGCTTTAGACCATATTCATGCCCTGGGTATCGCCTACCGTGACTTGAAACCGGAGAATGTCCTTGTCCAGCAGTCCGGTCACGTGACCCTCACCGACTTTGATCTCTCTCGCAATCTCACCCCCAAAACCATCCCACAAATTCTGTCCGATAACCGAAGTAAGCATCGCAGGAATTTCACGCGCTGGATTCCTGTCCCGCCAGACATTTTTCACAGCAGAAAAGGTTTGAAGAAGGTCAAGTCCGCCAAAGTCATACCGGTGAGCAGAAGGAAACCGAGCTTCTCAAATGGCGAGCGTTCTAACTCGTTCGTTGGAACAGAAGAGTACGTTTCGCCTGAGGTCGTTCGCGGCGACGGACACGAGTTCGCAGTCGACTGGTGGGCCCTCGGCATATTGGCGTACGAGATGCTGTATGGCACGACGCCGTTCAAGGGAAGGAACCGCAAAGAAACCTTTCGTAACGTCTTGATGAAGGCGCCGGTGTTCGTGGGGAAGCCAACGACGCTGACTGACCTCATCCAACGCCTGCTGCAGAAAGACCCCACAAATCGATTGGGTTACGTGCGCGGTGCAAGCGAGATCAAGGAGCACGAGTTCTTCACAGGGGTCCAGTGGGAACTACTAACGGAGGTTGTACGGCCGCCGTTCATTCCGTCCAGAGATGACGCGGACTGGACATGGACGGAGCGATTCAGCGGGGGCGGGGTGGAGATAGGGGAATACTTTGAGAGGCTAAGATCGCCGCCGTCACCGGAGAAAGGGCGGGATATATCTTTAACAGAATTCTAA 1248 0.5521 MKQHPCLDASFLHHQSEGRRDMESATPPSPELKLDHLRALKVVGKGAMGTVFLVYDMVADPYARSPFALKVVEKSSIQNKLDADRRARWEIHVLSRLAHPFLPPLLGTFENHQLLAWATPYCPGGDLNVLRYRQTDRVFAPAVIRFYLAEIICALDHIHALGIAYRDLKPENVLVQQSGHVTLTDFDLSRNLTPKTIPQILSDNRSKHRRNFTRWIPVPPDIFHSRKGLKKVKSAKVIPVSRRKPSFSNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILAYEMLYGTTPFKGRNRKETFRNVLMKAPVFVGKPTTLTDLIQRLLQKDPTNRLGYVRGASEIKEHEFFTGVQWELLTEVVRPPFIPSRDDADWTWTERFSGGGVEIGEYFERLRSPPSPEKGRDISLTEF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3922 415 Pfam Protein kinase domain 40 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3922 415 Pfam Protein kinase domain 248 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3922 415 FunFam Serine/threonine-protein kinase OXI1 126 194 - -
Acco01g3922 415 SMART serkin_6 37 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3922 415 FunFam Serine/threonine-protein kinase OXI1 251 372 - -
Acco01g3922 415 PANTHER FLIPPASE KINASE 1-RELATED 24 373 - -
Acco01g3922 415 SUPERFAMILY Protein kinase-like (PK-like) 34 376 IPR011009 -
Acco01g3922 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Acco01g3922 415 Gene3D Transferase(Phosphotransferase) domain 1 126 195 - -
Acco01g3922 415 Gene3D Phosphorylase Kinase; domain 1 37 125 - -
Acco01g3922 415 ProSitePatterns Protein kinases ATP-binding region signature. 43 70 IPR017441 GO:0005524
Acco01g3922 415 Gene3D Transferase(Phosphotransferase) domain 1 250 372 - -
Acco01g3922 415 MobiDBLite consensus disorder prediction 1 30 - -
Acco01g3922 415 ProSiteProfiles Protein kinase domain profile. 37 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3922 Acco-ChrAcco01 54628257 54629504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3922 32 403 AGC Kinase Gene Family AT3G20830 60.938 6.14e-161 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Acco01g3922 Pkinase 5.8e-30 CL0016