Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3916 ATGAGAGAAAAAACTAACCAAAACCCTAGCAGCAAGGGAGTGAGAGGGGCCCCGGCTGGAGAGGGAATTGATAGCAACCTCATCGGCGGGAGTGCTCGGCCTCGCCGAAGGATGGAAGTGTGGAACAGTAGTGATGGTTCCCGAAGATCACACAAGGTTAACGGTAGACTAATGGACTTGAAGCTCGGCGGCGGACCACGAACAGCGACGGCGATGAGACCGGTTTCTGTGGGGCAATGGAGTTGGGCCATCGGGAGAGAAAGCCAGAACTCGGGCTTTCTCTTTTTTCTTCATTTCGGTCTCTCCGATGTGCTTGACTCTGCGAATTCCTCCCCAAACCTATTGTTGAAAGCTGAAACCCTCACCTATCATCACCCGCTGGTCTTCTTTTACGAGTCAATGAACCCTCAGTCTCAGAAGGCAACATCTGAAGCTAATAGAATGCATGATCTTAAGATCCCTTTGCTGCAGACTCCGCAAGATGCCACGCTCAGGGAGATAAAATTTAGAATACAAGATATTACTTGTGCATCCTGTGTAAATTCAATAGAATCTGTAGTTGGAAACCTTGATGGAGTTAATTGTGTTATGGTGTCGGCAATTGATGGCAAAGCTACAATCAAATATGTGCCAGAGCTCATTAGTGCCAAGAAAATAAAAGAAACTGTAGAAGAAGCAGGTTTTAGAGTTCACGAGCTTTCAGATCAAGACATATCAGTATGTAAAGTCAGGATTAAAGGAATGGCATGCACAAGCTGCTCTGAATCTGTTGAGCGTGCTCTCCAAATGGTCGATGGTGTGAAAAAGGCAGCAGTAGGCCTGGCTTTAGGAGAAGCAAAAGTGCATTTTGATCCTGATCTCACTGATGTAAACAAAATAATTGAAGCAATAGAAGATGCTGGCTTTGGAGTAGATCTCATTAGCTCAGGGACTGATGTGAATAAAGTGCATCTAAGACTTGAAGGACTTGATTCTCCAGATGATGTCAATGTTGTAATGTCATCTCTTGGATTAGCTGAAGGTGTAAATCATGTTGAGATGGACTTGACAGAACGTAAAGTTACAATTACCTATGATCCTGATGTTACAGGTCCCAGATCTCTTATACAGTGCATTCAAGCAGCTGCTCATGGCCCCAATGGATATCATGCAACCTTGTACTCTCATTCAAGACAAAGAGAAACAAGAAGCATGGATGAAATTCATATGTATAGGGATCAATTTTTGTTCAGCTGCTTATTTTCAGTTCCGGTGTTCTTATTTGCCATGGTACTTCCCATGCTTCCTCCGTATGGCAACTGGTTGAACTGTAAGATCCACAATATGTTAACTATTGGAATGTTTCTAAGATGGATCCTTAGCACGCCTGTTCAGTTCATAGTTGGCAAAAGGTTCTATCTTGGATCATATCATGCACTGAGGCGAAGATCTGCTAACATGGATGTGCTGGTTGCACTTGGCACTAATGCTGCATATTTTTACTCTATTTATATTCTAATTAAAGCGCTCACTTCAGTAACATTTCAAGGACAAGATTTCTTTGAGACCAGTTCCATGTTAATATCCTTTATTCTCTTGGGAAAATATTTGGAGGTTGTGGCTAAAGGGAAAACATCAGATGCTTTGGCAAAGTTGACACAACTTGTTCCTGATAAAGTCTGCTTATTAGCCCTAGATGCTGAGGGAAATGTCATCTCTGAGACAGAAGTAGACACACAACTTATACAAAGGAACGACATAATTAAAATTGTTCCTGGGGCGAAAATTCCTGTTGATGGTATTGTTATAAAAGGGCAAAGTTATGTCAATGAAAGTATGATCACAGGTGAGGCAACACCTATTGATAAAAGTCCGGGAGACAAGGTTATTGGTGGGACCGTGAATGAGAATGGCTGCTTAGTGGTTAAGGCCACACATGTTGGAACAGAAACTGCACTTTCTCAAATTGTTCAACTTGTAGAAGCTGCTCAACTTGCTAAAGCACCGATCCAAAAACTTGCTGACCATATTTCAAAAATTTTTGTTCCGATAGTGGTTGTTGCAGCAGTCATAACCTGGCTGGGATGGTTTATTCCTGGCGAAGCTGGCATTTACCCTAAGTATTGGATACCAAAAGCTATGGATGCATTTGAGCTTGCTTTGCAATTTGCTATTTCAGTTCTAGTTGTTGCCTGCCCATGTGCTCTGGGTCTAGCAACACCAACAGCAGTCATGGTTGCTTCAGGTATTGGTGCTTCTCAAGGGGTACTCATCAAGGGAGGAGATGCACTGGAAAAGGCGCACAAGGTGAATGTTGTTGTGTTTGATAAGACAGGGACACTTACCATTGGAAAACCAGAGGTAGTTAGTGCTGTGCTATTTTCTGAATTTTTGATGGAGGAGTTATGTGACATGGCCATTGCCGTGGAGGCTAGCAGTGAACACCCAATAGCAAAAGCTGTTGTGGTTTATGCAAAGAGGCAGCGCCAGCAGTTTGGGTCTAGTGCTGAGCAAGTCTTCGATGTGAAGGACTTTGAGGTCCACGTGGGGGCTGGGGTAAGTGGAAAAGTTGGCGGGAGAACAGTTTTAGTTGGGAACAAACGACTAATGCATTCTCGTAACGTTCCAATAAGTGGCGAGGTTGAAAGGTATGTTTCTGAAAATGAAGTTCTGGCTAGAACGTGTGTGTTAGTTTCAATTGACGGAAAGATTGCTGGAGCTTTCTCTGTAACTGATCCTGTAAAGCCCGGGGCTAAGCGAGTGATATCTTTTCTGCACACCATGGGCATCTTAAGCATCATGGTGACCGGTGATAACCGCGCTACTGCGACTGCTATTGCAGATGAAGTGGGTATTGACAAGGTGTTTGCTGAGACTGATCCACTGGGAAAAGCAGATAAGGTTAAAGACTTACAGATGAAAGGTATGGTGGTGGCAATGGTGGGCGATGGAATCAATGACTCACCAGCTTTAGTTGCTGCTGACGTGGGTATGGCAATTGGTGCTGGGACTGACATAGCCCTAGAGGCAGCTGATATAGTTCTGGTGAAAAGCAGCTTGGAGGATGTAATAACAGCCATAGATCTGTCGAGAAAGACCATGTCTCGTATCCGTCTAAACTACATGTGGGCTCTGGGTTACAACATTCTGGGCATGCCAATTGCTGCCGGCATCTTGTACCCGTTCACCGGAATCAGGCTGCCCCCGTGGCTTGCAGGTGCCTGCATGGCCGCTTCTTCTCTGAGTGTTGTTTGTTCCTCTCTCTTGTTGCAGCTATACAAGAAACCATTGCACACGGCATCCACTTGA 3288 0.4437 MREKTNQNPSSKGVRGAPAGEGIDSNLIGGSARPRRRMEVWNSSDGSRRSHKVNGRLMDLKLGGGPRTATAMRPVSVGQWSWAIGRESQNSGFLFFLHFGLSDVLDSANSSPNLLLKAETLTYHHPLVFFYESMNPQSQKATSEANRMHDLKIPLLQTPQDATLREIKFRIQDITCASCVNSIESVVGNLDGVNCVMVSAIDGKATIKYVPELISAKKIKETVEEAGFRVHELSDQDISVCKVRIKGMACTSCSESVERALQMVDGVKKAAVGLALGEAKVHFDPDLTDVNKIIEAIEDAGFGVDLISSGTDVNKVHLRLEGLDSPDDVNVVMSSLGLAEGVNHVEMDLTERKVTITYDPDVTGPRSLIQCIQAAAHGPNGYHATLYSHSRQRETRSMDEIHMYRDQFLFSCLFSVPVFLFAMVLPMLPPYGNWLNCKIHNMLTIGMFLRWILSTPVQFIVGKRFYLGSYHALRRRSANMDVLVALGTNAAYFYSIYILIKALTSVTFQGQDFFETSSMLISFILLGKYLEVVAKGKTSDALAKLTQLVPDKVCLLALDAEGNVISETEVDTQLIQRNDIIKIVPGAKIPVDGIVIKGQSYVNESMITGEATPIDKSPGDKVIGGTVNENGCLVVKATHVGTETALSQIVQLVEAAQLAKAPIQKLADHISKIFVPIVVVAAVITWLGWFIPGEAGIYPKYWIPKAMDAFELALQFAISVLVVACPCALGLATPTAVMVASGIGASQGVLIKGGDALEKAHKVNVVVFDKTGTLTIGKPEVVSAVLFSEFLMEELCDMAIAVEASSEHPIAKAVVVYAKRQRQQFGSSAEQVFDVKDFEVHVGAGVSGKVGGRTVLVGNKRLMHSRNVPISGEVERYVSENEVLARTCVLVSIDGKIAGAFSVTDPVKPGAKRVISFLHTMGILSIMVTGDNRATATAIADEVGIDKVFAETDPLGKADKVKDLQMKGMVVAMVGDGINDSPALVAADVGMAIGAGTDIALEAADIVLVKSSLEDVITAIDLSRKTMSRIRLNYMWALGYNILGMPIAAGILYPFTGIRLPPWLAGACMAASSLSVVCSSLLLQLYKKPLHTAST 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3916 1095 PRINTS P-type cation-transporting ATPase superfamily signature 767 781 - -
Acco01g3916 1095 PRINTS P-type cation-transporting ATPase superfamily signature 603 617 - -
Acco01g3916 1095 PRINTS P-type cation-transporting ATPase superfamily signature 921 931 - -
Acco01g3916 1095 PRINTS P-type cation-transporting ATPase superfamily signature 899 910 - -
Acco01g3916 1095 PRINTS P-type cation-transporting ATPase superfamily signature 974 993 - -
Acco01g3916 1095 PRINTS P-type cation-transporting ATPase superfamily signature 997 1009 - -
Acco01g3916 1095 SUPERFAMILY HAD-like 765 1080 IPR036412 -
Acco01g3916 1095 ProSiteProfiles Heavy-metal-associated domain profile. 239 305 IPR006121 GO:0046872
Acco01g3916 1095 Pfam E1-E2 ATPase 566 745 - -
Acco01g3916 1095 CDD HMA 168 231 IPR006121 GO:0046872
Acco01g3916 1095 FunFam ATPase copper transporting beta 162 235 - -
Acco01g3916 1095 CDD HMA 318 385 IPR006121 GO:0046872
Acco01g3916 1095 MobiDBLite consensus disorder prediction 38 52 - -
Acco01g3916 1095 SFLD p-type atpase 749 1026 IPR044492 -
Acco01g3916 1095 ProSitePatterns E1-E2 ATPases phosphorylation site. 769 775 IPR018303 -
Acco01g3916 1095 Pfam Heavy-metal-associated domain 243 302 IPR006121 GO:0046872
Acco01g3916 1095 Pfam Heavy-metal-associated domain 169 228 IPR006121 GO:0046872
Acco01g3916 1095 CDD P-type_ATPase_Cu-like 408 1070 - -
Acco01g3916 1095 FunFam Copper-transporting ATPase 1, putative 535 657 - -
Acco01g3916 1095 Gene3D - 160 238 - -
Acco01g3916 1095 ProSitePatterns Heavy-metal-associated domain. 245 274 IPR017969 GO:0046872
Acco01g3916 1095 Gene3D - 239 310 - -
Acco01g3916 1095 Gene3D - 313 390 - -
Acco01g3916 1095 Pfam haloacid dehalogenase-like hydrolase 763 988 - -
Acco01g3916 1095 CDD HMA 242 304 IPR006121 GO:0046872
Acco01g3916 1095 NCBIfam copper ion binding protein 243 304 IPR006122 GO:0005507
Acco01g3916 1095 NCBIfam copper ion binding protein 167 230 IPR006122 GO:0005507
Acco01g3916 1095 SUPERFAMILY Calcium ATPase, transduction domain A 568 653 IPR008250 -
Acco01g3916 1095 SUPERFAMILY Calcium ATPase, transmembrane domain M 512 761 IPR023298 -
Acco01g3916 1095 MobiDBLite consensus disorder prediction 1 52 - -
Acco01g3916 1095 ProSiteProfiles Heavy-metal-associated domain profile. 165 231 IPR006121 GO:0046872
Acco01g3916 1095 Gene3D - 758 1024 IPR023214 -
Acco01g3916 1095 NCBIfam HAD-IC family P-type ATPase 520 1051 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco01g3916 1095 Gene3D - 535 657 - -
Acco01g3916 1095 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 146 1091 - -
Acco01g3916 1095 FunFam Copper-transporting ATPase HMA5 238 309 - -
Acco01g3916 1095 SUPERFAMILY HMA, heavy metal-associated domain 310 385 IPR036163 GO:0046872
Acco01g3916 1095 FunFam Probable copper-transporting ATPase HMA5 893 1031 - -
Acco01g3916 1095 ProSiteProfiles Heavy-metal-associated domain profile. 314 380 IPR006121 GO:0046872
Acco01g3916 1095 SFLD C1.7: P-type atpase like 749 1026 - -
Acco01g3916 1095 Gene3D - 778 907 IPR023299 GO:0000166
Acco01g3916 1095 NCBIfam heavy metal translocating P-type ATPase 480 1083 IPR027256 GO:0006812|GO:0016020|GO:0019829
Acco01g3916 1095 PRINTS Copper-transporting ATPase 1 signature 192 215 - -
Acco01g3916 1095 PRINTS Copper-transporting ATPase 1 signature 166 191 - -
Acco01g3916 1095 PRINTS Copper-transporting ATPase 1 signature 263 284 - -
Acco01g3916 1095 SUPERFAMILY HMA, heavy metal-associated domain 161 236 IPR036163 GO:0046872
Acco01g3916 1095 SUPERFAMILY HMA, heavy metal-associated domain 237 309 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3916 Acco-ChrAcco01 54562162 54569660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3916 169 1089 Primary Pumps ATPases AT1G63440 57.282 0.0 1069