Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3913 ATGCTCACTATATATTTATCGACAATAAGGCACAAAGATCATGTTTTTCGTCATAATATTCAAGTTCCTTCGAGTTGGAAACATCCTGGCCGCCGAACGATCCCTGTCCGGCTCTCGTTTCCCTTCGCCTGCACTCCACTGAATCCTAGTACCACTATCTCTGGTTCATCAATGGCCGAAACCCCTTGCAAGTCTCTTCGATCTCCCACCAAATGCAAACAACAATCGCGTTTGGATTCTAGTTCCTCACCCTCAGTAAACCCCGTAACCCCACAATCTGTGGCTCCTCGCAGATCGACCCGCCGTAAGTTGCTGGCCTTCGATTACGCCAATCCTCAAAGTCCACTCAATCGCATAGGTGAACTTTGTGAACTTCCGTCAAAAACTCCAACTAAGGATAAAGCTCAGCAAAGGAGAAATTTGAACAGGTCTCGTCGATCGATTGATTATGCTGAAGAATCCTGCGAAGGTAAAGTGATAACCCGCAGAAATAGAACTAGGGAATGCGGTTCAATCAGCGAAGCACATAAGAAAGAGAGCAAATCTAGATCTGCAAAATGCATGGCGTCTACTCCGAGGGGCGAAATTTCGAAGAGGAGAAATGATAAAGATTCAGATTCAGCCGAAGTTTCTATCGCTCCAGTGTCGCCTGATCAATCTGAAACAAGGAAGAGGAAGAGGGTTGATGAAAGAAGGGTTGTTACAAGGGCTACGGTAGCAAGAAATGGGAAATCTGAGAAGGGGCAAAAGAGCAATACGTTGCCTAAGAGACGGGCGTATTATAAAAAAGTGGTATATGATGGGTGTGAGTTTGAAGTAGGCGATGATGTATATGTGAAGAGGAGAGAAGACACCGACTCAGATAACGAATATCCAGAAGTGGAGGAATGTAGGTTGTGTTTTAGTTCTGGGGACGATGTTATGATTGAGTGTGATGATTGTTTACGTGGCTTTCATTTGAAATGTTTGACTCCACCATTGAAGGAGGTTCCGGAAGGAGATTGGATTTGTGGGTTTTGTGAGGCTCGTAAGATAGGCAGAGATGTTAGTTTTCCCATGCCTCCGGAGGGCAAGAAGCTAGTTAGGACATTAAGGGAGAAGCTTCTTTCCAGCGATTTGTGGGCAGCTCACATTGAAAGTATATGGAAAGAGGGGGACGGTACCTATTATTGTCGTGTCAGGTGGTATGTGATCCCAGAAGAGACAGCTATTGGGAGACAGCCTCATAATCTGAAGAGGGAGCTATATAGAACAAATGATTTTGCAGACATTGAGATGGAATCTATCATTAGACATTGCTTTGTCATGATTCCCAAAGACTTTGCCAAGGCCAACGAGGGAGATGATATTTTCTTTTGTGAATATGAATATGACGTTCAGTGGCATGCTTTCAAGCGTCTTGCTGAGATTGACAATGACAATCAGGTTGGTGAAGAGCCTGACAGTGATGAAGATTGGAATCTTTGCAAGGAATCAGACTCTGATACAGATGATGATGTTGAGTATGATGCAGAGAATTTTAAAGGTCCAAAACCTCAGTCGTCATCAAATCATGCGCTAGCCGCAAATTTGCGTAAGGGGCAGTTTTTTGGCCTTCAAAAGATAGGCACCAAAAAAATTCCACAGTTTATAAGGAATCACAAACAAACTGATATTGAGAGAGCAAAGGCTATGCTGTTGCTGGCATCATTACCTAAATATTTACCTTGTAGGAATAAAGAAATGGAGGAGATAGCCTCGTTTGTAAAAGGCGCCATCTGTGATGATCAATGTCTAGGACGTTGTTTGTATATCCACGGTGTTCCTGGAACTGGCAAGACAATGAGTGTACTATCAGTAATGAGGAGTTTGAGGTCAGAAGTTGATGAAGGAACCATAAGACCGTACTGTTTTGTGGAGATTAATGGTTTGAAATTGGCGTCTCCAGAGAATATTTACAGGGTCATATATGAGGCATTAAATGGTCACAGGGTCAGCTGGAAAAAGGCCCTTCACTTGTTAAATGAGAGATTTGTGGAAGGGAAAAAAACTGGAGAAAAGGCTGACCAGCCATGCATTCTTCTAATTGATGAACTTGATCTTCTTGTAACCAGAAATCAGTCGGTTCTCTACAATATTCTTGATTGGCCTACTAAGCCACATTCCAAACTAATTGTGATAGGGATAGCAAATACCATGGATCTTCCAGAGAAGTTACTTCCTCGTATATCAAGTCGAATGGGTATCCAGAGGCTTTGCTTTGGCCCATATAACTATCAGCAGCTTCATGAAATCATTTCAAGTCGCTTGAAGGGAATAGATGTGTTTGAGACGCAAGCTATAGAATTCGCTTCAAGAAAGGTTGCAGCAATCTCAGGGGATGCACGACGTGCTTTGGAAATATGCAGACGTGCTGCAGAAATTGCTGATTATCGTATTAAGAAGCTGAATTCAAATTCTGACTTAGCTGCAGCAGGAAAGGGACTTGTTGCTATGGTAGATGTTGAAGCTGCCATCCAAGAAATGTTTCAGGCTCCTCATATTCAGGTGATGAAAAGCTGTTCTAGACTTGGCAAAATATTTTTGACAGCCATGGTACACGAGCTATATAAAACTGGCATGGGCGAAACCACTTTTGAGAAGTTGGCAATGGCGGTATCATGTCTGTGCGCCAGCAACGGAGAGGTTTTTCCTGGATATGACACGCTCCTTCATGTTGGATGTAGGCTGGGCGAATCCAGGATTCTTTTATGTGAAGCAGGTTCCAAGCACAGGTTGCAAAAGTTGCAGCTCAACTTCCCTAGTGATGATGTGGCATTTGCGCTGAGAAGCTGCGAGGATTTACCCTGGCTAGCCAAGTACCTACTTTAG 2850 0.434 MLTIYLSTIRHKDHVFRHNIQVPSSWKHPGRRTIPVRLSFPFACTPLNPSTTISGSSMAETPCKSLRSPTKCKQQSRLDSSSSPSVNPVTPQSVAPRRSTRRKLLAFDYANPQSPLNRIGELCELPSKTPTKDKAQQRRNLNRSRRSIDYAEESCEGKVITRRNRTRECGSISEAHKKESKSRSAKCMASTPRGEISKRRNDKDSDSAEVSIAPVSPDQSETRKRKRVDERRVVTRATVARNGKSEKGQKSNTLPKRRAYYKKVVYDGCEFEVGDDVYVKRREDTDSDNEYPEVEECRLCFSSGDDVMIECDDCLRGFHLKCLTPPLKEVPEGDWICGFCEARKIGRDVSFPMPPEGKKLVRTLREKLLSSDLWAAHIESIWKEGDGTYYCRVRWYVIPEETAIGRQPHNLKRELYRTNDFADIEMESIIRHCFVMIPKDFAKANEGDDIFFCEYEYDVQWHAFKRLAEIDNDNQVGEEPDSDEDWNLCKESDSDTDDDVEYDAENFKGPKPQSSSNHALAANLRKGQFFGLQKIGTKKIPQFIRNHKQTDIERAKAMLLLASLPKYLPCRNKEMEEIASFVKGAICDDQCLGRCLYIHGVPGTGKTMSVLSVMRSLRSEVDEGTIRPYCFVEINGLKLASPENIYRVIYEALNGHRVSWKKALHLLNERFVEGKKTGEKADQPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYQQLHEIISSRLKGIDVFETQAIEFASRKVAAISGDARRALEICRRAAEIADYRIKKLNSNSDLAAAGKGLVAMVDVEAAIQEMFQAPHIQVMKSCSRLGKIFLTAMVHELYKTGMGETTFEKLAMAVSCLCASNGEVFPGYDTLLHVGCRLGESRILLCEAGSKHRLQKLQLNFPSDDVAFALRSCEDLPWLAKYLL 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3913 949 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 401 943 - -
Acco01g3913 949 FunFam Origin recognition complex subunit 1 745 837 - -
Acco01g3913 949 FunFam Origin recognition complex subunit 1 360 551 - -
Acco01g3913 949 SMART BAH_4 343 468 IPR001025 GO:0003682
Acco01g3913 949 MobiDBLite consensus disorder prediction 193 207 - -
Acco01g3913 949 MobiDBLite consensus disorder prediction 51 100 - -
Acco01g3913 949 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 284 353 IPR013083 -
Acco01g3913 949 SUPERFAMILY FYVE/PHD zinc finger 283 344 IPR011011 -
Acco01g3913 949 FunFam Origin recognition complex subunit 1 549 748 - -
Acco01g3913 949 Pfam AAA lid domain 770 803 IPR041083 -
Acco01g3913 949 ProSitePatterns Zinc finger PHD-type signature. 297 340 IPR019786 -
Acco01g3913 949 MobiDBLite consensus disorder prediction 123 145 - -
Acco01g3913 949 MobiDBLite consensus disorder prediction 170 184 - -
Acco01g3913 949 Gene3D - 548 744 IPR027417 -
Acco01g3913 949 MobiDBLite consensus disorder prediction 474 502 - -
Acco01g3913 949 ProSiteProfiles Zinc finger PHD-type profile. 294 343 IPR019787 -
Acco01g3913 949 MobiDBLite consensus disorder prediction 473 517 - -
Acco01g3913 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 561 808 IPR027417 -
Acco01g3913 949 SMART PHD_3 296 341 IPR001965 -
Acco01g3913 949 Gene3D - 238 492 IPR043151 -
Acco01g3913 949 MobiDBLite consensus disorder prediction 170 232 - -
Acco01g3913 949 Pfam PHD-finger 297 342 IPR019787 -
Acco01g3913 949 ProSiteProfiles BAH domain profile. 352 468 IPR001025 GO:0003682
Acco01g3913 949 MobiDBLite consensus disorder prediction 51 97 - -
Acco01g3913 949 MobiDBLite consensus disorder prediction 127 145 - -
Acco01g3913 949 SMART AAA_5 592 746 IPR003593 GO:0016887
Acco01g3913 949 FunFam Origin recognition complex subunit 1 292 359 - -
Acco01g3913 949 Pfam BAH domain 377 465 IPR001025 GO:0003682
Acco01g3913 949 Gene3D - 745 837 - -
Acco01g3913 949 Pfam ATPase family associated with various cellular activities (AAA) 597 742 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3913 Acco-ChrAcco01 54544439 54552763 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3913 54 948 Core DNA Replication Machinery Family AT4G14700 57.552 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Acco01g3913 AAA 7.7e-20 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3913 01 54544439 54552763 Acco01g3913 01 54544439 54552763 ECH