Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3893 ATGTATGGATTTGCTCTGCCTCTAACTGGAAACAATTTCCTTTACTGCGCTAAACTGTGTTTTAGATCCCTCGCACCATCCCTGCTCCTGCAAAACCTAGCTAATTCTTCCTTACCCAATAGTGCATTCAGTCATCGACGTGATTTTAATCCCCTTCTTTTCCAATCGGGATCGTGCTGGAACTATAGGAAATATACAAGAGACAGCATCACTCTTCTGAAAGCCAGCCGTCGGGAGTCTCCTTATGAAGTTTTGGGCGTATCTCCATCAGCTACAGCGGATGAAATAAAAAAGGCATACAGAAAGCTTGCTCTTAAGTATCATCCCGATGTCAATAAAGAGGACAAGGCGCAGGAGAAGTTTATGAGGATAAAACACGCGTATAATACATTGATAAATTCTACTTCGCGTAGAAAATTTGATTCTGGAAATAGTGGTTCCAATTCTTATTATTCCACTCAGAGAAGCCAAAGTGGCACTGCAAAAGAGGAAGAAGAATTTTATGGATTAGGTAATTTTTTGAGGGATGTTCAAATAACAATAGAGGATTTTTTCAAAGATCTTCAAGAAGAATTCAGGAACTGGGAAGCAAACTCTACTTCACAAGGAAAGCCGAAGAGCCTATGGGAGGAATTGGCAGAAATAGGGGAAGAATTTGTGGAGTTTCTGGAGAAAGAGCTTAATATGGTTGATCCAGAAGTTGATTCGAATGAGAATTATAAGAAGCCTCAGGAAGCAAATCCTTCTCGTACTTCTGCTGGCAGTGGCCCTCAAGATGAAACTGGCAGGGGGAACAGCAGTATTAAGGATAACCTTGATGACATAGAAGCTACTCTTGCTCAGTTAAAAAAGGAATTAGGAGTTGGCATGTAA 873 0.4078 MYGFALPLTGNNFLYCAKLCFRSLAPSLLLQNLANSSLPNSAFSHRRDFNPLLFQSGSCWNYRKYTRDSITLLKASRRESPYEVLGVSPSATADEIKKAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLINSTSRRKFDSGNSGSNSYYSTQRSQSGTAKEEEEFYGLGNFLRDVQITIEDFFKDLQEEFRNWEANSTSQGKPKSLWEELAEIGEEFVEFLEKELNMVDPEVDSNENYKKPQEANPSRTSAGSGPQDETGRGNSSIKDNLDDIEATLAQLKKELGVGM 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3893 290 PRINTS DnaJ domain signature 82 100 IPR001623 -
Acco01g3893 290 PRINTS DnaJ domain signature 100 115 IPR001623 -
Acco01g3893 290 PRINTS DnaJ domain signature 116 136 IPR001623 -
Acco01g3893 290 SUPERFAMILY Chaperone J-domain 77 140 IPR036869 -
Acco01g3893 290 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 43 255 - -
Acco01g3893 290 ProSitePatterns Nt-dnaJ domain signature. 121 140 IPR018253 -
Acco01g3893 290 ProSiteProfiles dnaJ domain profile. 80 144 IPR001623 -
Acco01g3893 290 Pfam DnaJ domain 81 141 IPR001623 -
Acco01g3893 290 MobiDBLite consensus disorder prediction 241 265 - -
Acco01g3893 290 MobiDBLite consensus disorder prediction 138 158 - -
Acco01g3893 290 MobiDBLite consensus disorder prediction 138 163 - -
Acco01g3893 290 CDD DnaJ 81 133 IPR001623 -
Acco01g3893 290 SMART dnaj_3 79 136 IPR001623 -
Acco01g3893 290 Coils Coil 265 285 - -
Acco01g3893 290 Gene3D DnaJ domain 77 201 IPR036869 -
Acco01g3893 290 MobiDBLite consensus disorder prediction 231 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3893 Acco-ChrAcco01 54440898 54443921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3893 76 145 C2H2 Transcription Factor Family AT1G74250 38.158 7.95e-08 51.6