Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3888 ATGGGGGAGATTTGCTGCGGCGACTCCTCGGAGGCGTGTCGGCCCACCTCGCGTGAGGCCAGAAGGAGGAGAATGGAGATCAGGTGCTTCAAGGTCGTAGAGGGCGAGGAGGAGCGCCCCAAACTCCGCTTTGTTCCCCGCTCCTCTCGGCACTCTGACGTCGCCGTCGACAATTGTGCCGCTGGCATAGAGAAAGCCCTCGCGTTTCTCTCCCCCGGCCAGGCAAAGTCAGAGACCCGTGCCAAACACGCTCCCGCCGACACCTTCGACCCAACGCACTCCACAGTCTCGACAGGTCAGTATCCTAAATTTGGGGTCGCGTCGGTGTGTGGAAGGCGAAGACACATGGAGGATGCGGTGGCCGTCCATCCCTGGTTTTGCGGGGACCTTTACGCCTCTGCTGAATTTCATTACTTTGGAGTCTACGACGGCCACGGTTGTTCTCATGCGGCGGCTAAGTGTAAGGACCGATTACATGAGTTGGTGAAAGAAGAGCTAGATAAACAGGAGTGGACGATGGGGTGGGAGGGCGCGATGGAGCGAAGCTTTTCGCGGATGGACCAGGAGGTCATTGCTTGGAATGCCAATGTCTTGGAAGCCAATTGTAGGTGTGAGCTTCGGTCCCCCGAGCGCGACACCGTCGGATCTACGGCTGTCATTGCTGTTTTGACCGCCGACAAGGTCATCGTCGCCAACTGCGGCGATTCGAGGGCCGTGCTCTGCCGCAACGGCAAACCCATCCCCCTCTCGTCCGATCACAAGCCGGATCGTCCGGACGAGCTGAACCGGATCCATGAAGCGGGAGGACGGGTTATATACTGGGACGGACCACGCGTGCTGGGAATGCTTGCCATGTCAAGAGCCATAGGTGACAATTACTTAAAGCCTTATGTCAGCTGCGTGCCGGAGGTGACGATAACGGATCGGACGTCGGAGGATGACTGTTTGATACTGGCAAGTGATGGGGTATGGGACGTGGTGTCGAATGAGACAGCATGCGGGGTGGCACGTATGTGTTTGCGAGGAAGAAACCACGCGCCACCGAGACCAGAGGTGGCGTTGGAGGGCGAAATGGAAGGTGTTGCGATGGAGATGTCAGACAAGGCATGCTCTGATGCGGCAATGTTGCTGACGAAGCTCGCTTTGGCCAGGCACTCCACTGACAACGTCAGCGTACTGGTGGTGGATCTCAGGAGGAGGGCGTGA 1206 0.5821 MGEICCGDSSEACRPTSREARRRRMEIRCFKVVEGEEERPKLRFVPRSSRHSDVAVDNCAAGIEKALAFLSPGQAKSETRAKHAPADTFDPTHSTVSTGQYPKFGVASVCGRRRHMEDAVAVHPWFCGDLYASAEFHYFGVYDGHGCSHAAAKCKDRLHELVKEELDKQEWTMGWEGAMERSFSRMDQEVIAWNANVLEANCRCELRSPERDTVGSTAVIAVLTADKVIVANCGDSRAVLCRNGKPIPLSSDHKPDRPDELNRIHEAGGRVIYWDGPRVLGMLAMSRAIGDNYLKPYVSCVPEVTITDRTSEDDCLILASDGVWDVVSNETACGVARMCLRGRNHAPPRPEVALEGEMEGVAMEMSDKACSDAAMLLTKLALARHSTDNVSVLVVDLRRRA 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3888 401 Gene3D - 98 401 IPR036457 -
Acco01g3888 401 ProSiteProfiles PPM-type phosphatase domain profile. 103 397 IPR001932 -
Acco01g3888 401 SMART PP2C_4 93 395 IPR001932 -
Acco01g3888 401 ProSitePatterns PPM-type phosphatase domain signature. 138 146 IPR000222 GO:0043169
Acco01g3888 401 PANTHER PROTEIN PHOSPHATASE 73 397 IPR015655 GO:0004722|GO:0006470
Acco01g3888 401 CDD PP2Cc 103 397 IPR001932 -
Acco01g3888 401 SMART PP2C_SIG_2 122 397 IPR001932 -
Acco01g3888 401 Pfam Protein phosphatase 2C 104 389 IPR001932 -
Acco01g3888 401 FunFam Protein phosphatase 2C 50 101 401 - -
Acco01g3888 401 SUPERFAMILY PP2C-like 94 398 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3888 Acco-ChrAcco01 54413439 54415037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3888 102 399 PP2C-type Phosphatase Gene Family AT2G29380 67.224 3.17e-144 412