Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3883 ATGGATGGCCAAGATTCTGAATTCTATGCAAGCTTGGTTTCCGCAAGTACAGCTGCTCATAGTTCTATCATTCCTGTTCGGGTCTTGGCCCGCAATATGATCTCCGGGGACGCCGTTCTCGACAACTTTGATGGTTCCCCTGACGGAGAGGATGCTCCTCTTTCTTCGTTCTCAAATCGCGCCTCAGTCAACGGGCTTATTATTGGTGATCGATCTGTCGAATCATCTTCCGTTTCTCCGGCGAACACAGAATCTCCCGTTCATTCTGGCACCGATTCAAATGAAGAATTTACGGAGATTACCAAGTATTCCAATCATATTCTCAGATACATAAGCGACATCCTCATGGATGAAGAAGATGATCTGGAGAGTCAGCCCTGCATGTTGCAGCATTGTGTGGCACTCCAAGCTGCTGAAAAATCATTCTACGATGTCCTGACTCCCAGTAGTTCCGCATCGCCCCACCACAGCGGCAGCTACACCAGTACTGATCATTCGAGTGAGGCCGATTGGTCTTCTTATTTATGCCTCGATCCATTAACAGAGACACAAGAATGCGATTCTCAACCTGCAGATGGTGAGATTCACACTTCAACAAGCAGTGGGGGGAGGGAAAAGAGGAGCCATGAGATAGATGACATTACAAATGAGGAAGAGGGGAGAGGAAGTAAGATTTCGGCGGTGTACTGGGAGGATTCAGAACAATCGGAGGTGTTCGATGAGCTACTCGTTTTCCTGGGGGGAACAAGTCCGGGCGTGGCTCAAGAATCATCATCAAAAAATGTGAATATGAACTCAAAAGGTAAGGCAAATCGTTCCAAGAAAGGAGCAAATAAAGGGGCAACAGTAGACTTGTGGACTCTGCTGACTCAATGTGCACAGGCAGTGGCAAACTTTGACCAAAGAAATGCAAACGAGCTTCTGAAGCAGATAAGGCAGTACTCTTCTCCTTTTGGGGATGGAATTGAGCGTTTGTCTCATTGCTTTGCCAACGGACTGGAGATGCGTTTGGCTGCCGGGAAGCCATCTTGGATGCCGCTCGATTTCAACGGGGTTAATGCTGCTGATATGTTAAGAGCTTGCAAGCTATACATAACAGCATCTCCCTTTCAGAGAGTCACCAACTTCATGTCTGTCGGAATGATCATGAAGCAAGTGGAGAACGGAAGAGGCCTTCATATTATTGATTTTGGGATCAACTATGGTTTCCAGTGGCCCTGCCTTATCAATCGTGTTTCAAAAAGATCAGAAGGACCTATCAAGATCCGGATCACAGGAATCGATTTTCCCCAACCCGGATTTCGCCCCACTGAGAGGCTGGAGGAGACAGGCAGGCGTTTGGCTAAATATAGCAGAAGCTTCAACGTGCCATTTGAGTACAACTGCGTTGCAAAGAAATGGGAAACCATACAGCTTAAGGATCTCAAATTAGATCCAAGCGAGGTGACGATTGTGAACTGCATGTACAGAATGAAGAACCTGCCCGATGAGACTGTGGGGGTTGACTGTCCGAGAGATGCTGTTTTGAAGATCATCAGGAAGATTAAACCAAGCATCTTCATGCATGGAATTGTCAATGGCACCTATAATGCACCATTTTTCCTAACTCGGTTCAAGGAGGCGCTGTTCCACTTCTCGACACTCTATGATATTCTTGAGGCTAACGTGGGGCGTGAAGATCCGCACAGGGTGATGGTTGAGAAAGAGATTTTTGGGAGGGACGCCATGAATGTGATAGCGTGCGAGGGGGCAGAGAGAGTAGAAAGGCCAGAGACGTACAAGCAGTGGCAGGTCAGGAACCAGAGAGCCGGATTCAAGCAAATCTACTTGGATGCAGAACGCACCAAGAAAGCAAAAGAGTTTGTGAAGACGGAATACCATAAGGATTTTGTGGTGGATGAAAATGGCAAATGGGTTTTGCTGGGATGGAAAGGCCGCATCGTTCATGCCCTTTCCTGTTGGATGCCTGCTTAA 1974 0.4737 MDGQDSEFYASLVSASTAAHSSIIPVRVLARNMISGDAVLDNFDGSPDGEDAPLSSFSNRASVNGLIIGDRSVESSSVSPANTESPVHSGTDSNEEFTEITKYSNHILRYISDILMDEEDDLESQPCMLQHCVALQAAEKSFYDVLTPSSSASPHHSGSYTSTDHSSEADWSSYLCLDPLTETQECDSQPADGEIHTSTSSGGREKRSHEIDDITNEEEGRGSKISAVYWEDSEQSEVFDELLVFLGGTSPGVAQESSSKNVNMNSKGKANRSKKGANKGATVDLWTLLTQCAQAVANFDQRNANELLKQIRQYSSPFGDGIERLSHCFANGLEMRLAAGKPSWMPLDFNGVNAADMLRACKLYITASPFQRVTNFMSVGMIMKQVENGRGLHIIDFGINYGFQWPCLINRVSKRSEGPIKIRITGIDFPQPGFRPTERLEETGRRLAKYSRSFNVPFEYNCVAKKWETIQLKDLKLDPSEVTIVNCMYRMKNLPDETVGVDCPRDAVLKIIRKIKPSIFMHGIVNGTYNAPFFLTRFKEALFHFSTLYDILEANVGREDPHRVMVEKEIFGRDAMNVIACEGAERVERPETYKQWQVRNQRAGFKQIYLDAERTKKAKEFVKTEYHKDFVVDENGKWVLLGWKGRIVHALSCWMPA 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3883 657 MobiDBLite consensus disorder prediction 184 220 - -
Acco01g3883 657 MobiDBLite consensus disorder prediction 184 198 - -
Acco01g3883 657 MobiDBLite consensus disorder prediction 253 276 - -
Acco01g3883 657 MobiDBLite consensus disorder prediction 253 271 - -
Acco01g3883 657 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 223 647 IPR005202 -
Acco01g3883 657 MobiDBLite consensus disorder prediction 147 167 - -
Acco01g3883 657 MobiDBLite consensus disorder prediction 73 96 - -
Acco01g3883 657 ProSiteProfiles GRAS family profile. 276 655 IPR005202 -
Acco01g3883 657 MobiDBLite consensus disorder prediction 199 220 - -
Acco01g3883 657 Pfam GRAS domain family 287 654 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3883 Acco-ChrAcco01 54388614 54390587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3883 107 657 GRAS Transcription Factor Family AT5G59450 44.029 1.99e-161 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco01g3883 GRAS 6.2e-104 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3883 01 54388614 54390587 Acco01g3883 01 54388614 54390587 ECH