Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3882 ATGGATCCAAATTTGTCTGCAGCTCGTGATTTCAGGAATGGACAACAAATAGATGATGGCGCTGACTTCTCTGCTACTAATCAGTACCTAAATCTAGGAAATGACTGGAATCCTGATGAAGACCATCAGAGCGCTCTTAATTACTACCGTGACATTTTTCATCAACCTGATTTGGACCCACTTGGTTATAATCCGTTCACAAGCTTGATTTCTGAAGGAGAACCGCTGAATCCATCCTGGAGTGCGAGTTCTGCGGAAGGTGTGCCGGATGTCCCGTTTTCAGCCGCGACTTCGGCTTCTGATCCTTCTCTAGAAGACTACGATTTTTCAGAAACCTTCAAGTACATGAGCCAAGTTCTTATGGAAGAGAACTTGGAACAGAAGCCATCCATGTTTTATGATCCGCTCAGTCTAAAACTTACTGAGAAATCATTCTATGACGCTCTTCGATACAACGACTCTCTCCCCCCCAATGAGCACCCTCTCATTGACACCGATGACAGCCCAGACGGTCATTCCTCTGGAACTGCTACTGATTCTAGTACCGGCGGGACCGGCAGCAGCACCAGCACAAGCACCAACACAAGCCCCAACGACTTAGAAATAAGGACCTCTTCGCCAGAGACCCCTGTTTTGGGAGATTATTCTTTCCAGTTCAAATCGCAATCCTTATCTCAGCAGTCCTCACAACCTCCAAATGCTTCAACTAATAGGAGCATCAGTGACGGACTGCTGAATTTGGATTCTTCTATTACTCAGCTTTTGGCTCAAAATATATTTAGTGACGCAGAATCTGTCTCGCAATTCAATAGAGGTTTAGAGGAAGCAAGCAAATTTCTTCCTAGAAGAGTTCAACTCGTCACTGATCTGGAAAGCACCACAGTGTCCGTGCAATCAAGGCTGGTGGGAGGAAAGGTGCCGCTGAATACGGAGAAAGGGGCTAGGGAGAATTTGCGTGGGTTGAAGGGTAGAAAGAATCACGACCGCGACGGTAGTGATGATGAAGAAGAAGGGAGAAGCAAGAAGCAGTCAGCGGTGTATGTTGATGAGAGTGAATTATCGGAAATGTTTGACAAAGTGTTGCTTAGTGTTGAGAATGTTCCGCTGTGTTCTGAGCACGAAAGCATGCAGGGTGGATCAGCGAATGACTTGCGGTCAAGTGAGCAGGCTGTGGAATCATCTGATGGAGAGAAGGCACACTCTAAGAAACAAGTCAGGAAGAAGGAAACGGTGGATTTGAACACACTTTTGGTTTTATCTGCACAAGCCGTGTCTAACAGCGATAGAAGGACTGCCCATGAATTACTAAAACAGATCAGGCAACATTCTTCACCCTTGGGGGATGCATCTCAGAGGGTGGCTCATTATTTCGCCAATGGCCTTGAGGCACGTTTGGTTGGTGGTGGTGCGGGAACCCAGCTATTTTATACTTCCCTGAGCTCCAAGAGGATCTCTGCTGCTGAAATTTTGAAAGCTTACCAAGTTTCAATCTCGGCCTCACCTTTTAAGAAGTTTGCACATTTCTTTGCAATAAAAATGATTTTTAAAGCAGCTGAAAAGGCAGAAACCCTCCATATTATTGATTTTGGTATCCTGTATGGTTTCCAGTGGCCAATGCTCATCAAATTTCTCTCAAATAGAGCTGGTGGACCTCCCAAGCTGCGCATCACCGGAATAGAATTTCCCCAACCTGGCTTTCGTCCAGCAGAAAGAATTGAGGAAACTGGTCGTCGTCTTGCTAACTATTGCAATCGATTTAATGTTCCCTTTGAGTACAAAGCTATAGCATCACAAAACTGGGAAACCATCCAAATTGAGGACCTTAAGATTGAGAGGAATGAGGTACTTGCTGTGAACTGTTTGCTTAGGTTAAAGAATTTACTGGATGAGACAATTGAAGTGAATAGTCCTAGGGATGCAATTCTAAAGCTAATAAGGAAGATGAAACCGGACCTTTTTGTTCAATGCATTGTTAATGGGTCCTACAATGCCCCTTTCTTTGTTACACGGTTCAGGGAGGCACTGTTCCATTTCTCGGCATTGTATGATGTGTTTGATACTTTGGTACCCCGTGATAACCAATGGAGGTTGATGCTCGAGAAAGAAATTTATGGTCGGGAGGCTATGAACGTTGTGGCATGTGAAGGATTAGAAAGGGTTGAGAGGCCTGAGACGTACAAACAATGGCAGGCAAGGGTTTCAAGGGCAGGTTTCAAGCAGCTCCCGTTGAATAGAGAGCTTATGGGCAAGTTCAGGGACAAGATGGAGGCGTGGTACCATAAAGATTTTGTGTTTGATGAGGACAGCAACTGGATGCTTCAGGGCTGGAAGGGACGTATTTTGTATGCCTCCACTTGTTGGGTTCCAGCATAA 2373 0.4526 MDPNLSAARDFRNGQQIDDGADFSATNQYLNLGNDWNPDEDHQSALNYYRDIFHQPDLDPLGYNPFTSLISEGEPLNPSWSASSAEGVPDVPFSAATSASDPSLEDYDFSETFKYMSQVLMEENLEQKPSMFYDPLSLKLTEKSFYDALRYNDSLPPNEHPLIDTDDSPDGHSSGTATDSSTGGTGSSTSTSTNTSPNDLEIRTSSPETPVLGDYSFQFKSQSLSQQSSQPPNASTNRSISDGLLNLDSSITQLLAQNIFSDAESVSQFNRGLEEASKFLPRRVQLVTDLESTTVSVQSRLVGGKVPLNTEKGARENLRGLKGRKNHDRDGSDDEEEGRSKKQSAVYVDESELSEMFDKVLLSVENVPLCSEHESMQGGSANDLRSSEQAVESSDGEKAHSKKQVRKKETVDLNTLLVLSAQAVSNSDRRTAHELLKQIRQHSSPLGDASQRVAHYFANGLEARLVGGGAGTQLFYTSLSSKRISAAEILKAYQVSISASPFKKFAHFFAIKMIFKAAEKAETLHIIDFGILYGFQWPMLIKFLSNRAGGPPKLRITGIEFPQPGFRPAERIEETGRRLANYCNRFNVPFEYKAIASQNWETIQIEDLKIERNEVLAVNCLLRLKNLLDETIEVNSPRDAILKLIRKMKPDLFVQCIVNGSYNAPFFVTRFREALFHFSALYDVFDTLVPRDNQWRLMLEKEIYGREAMNVVACEGLERVERPETYKQWQARVSRAGFKQLPLNRELMGKFRDKMEAWYHKDFVFDEDSNWMLQGWKGRILYASTCWVPA 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3882 790 ProSiteProfiles GRAS family profile. 404 788 IPR005202 -
Acco01g3882 790 MobiDBLite consensus disorder prediction 308 347 - -
Acco01g3882 790 MobiDBLite consensus disorder prediction 373 389 - -
Acco01g3882 790 MobiDBLite consensus disorder prediction 1 22 - -
Acco01g3882 790 MobiDBLite consensus disorder prediction 169 241 - -
Acco01g3882 790 MobiDBLite consensus disorder prediction 315 347 - -
Acco01g3882 790 MobiDBLite consensus disorder prediction 373 406 - -
Acco01g3882 790 MobiDBLite consensus disorder prediction 390 406 - -
Acco01g3882 790 MobiDBLite consensus disorder prediction 151 241 - -
Acco01g3882 790 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 367 783 IPR005202 -
Acco01g3882 790 Pfam GRAS domain family 414 787 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3882 Acco-ChrAcco01 54382501 54384873 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3882 112 790 GRAS Transcription Factor Family AT1G07530 52.131 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco01g3882 GRAS 1.3e-108 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3882 01 54382501 54384873 Acco08g0158 08 1025431 1028060 CCT