Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3880 ATGGATCCCAATCGCATCTCCAGTTTCATCCACGGATATCAATCCAGCCAAATGCCTTGTCCGCTCAATTATGATCAGTATACCGATCCCTTAAATGGGATTCAGATACGCGATCCGTTCATGAACTTTGGATCTGTGGATACGAACTTTGCCGGAAATACTGCTTCTCTAGTTCTGCCTTCCGTTAGTGCGAATGTAGGCTCTCCCTTAGACGAGACAGAGTTCTCTGGCAATATGCTTGGGTACATAAACCAAGTGCTGATGGAAGAGGACATGGGAGAACAGCCCAGCATGTTTCATGATTCCTTGGCTCTTCAGGCGGCCGAGGAATCGTTATACGAGGTTATTGGTGAAAAATACCCTTCTGATTCCTCCATTCAACCTCATTTTCCCGACTATCACCGCGTGGAGACCTCCGAGGAAAGTGTCTCCGGCAACATCAGTGATCGTAGTAGCAGTGGCAGTTATGTTGCTAATGGTACCAACTCTGTTGAGTCCCAGTGGAGTGACTTGGACTTTAAAGATTACAAACCTTCTCTACTGCAAGCCACGTTTCCTGCAGATTTCGTTTTCCAGTCTCCTTCAATATCCACAGCACAACTTTCCACCAACCATATAAGCAAATCCAGGAATACCCGCCATAATTATAATGGGTTCGTGGGGAATTACAATACAGGGACTGGCTTCTCAGATTCTACATTGCTTGGCAAGAATGAGTCTGTGTTTCAATTTAAGAGAGGTGTGGAGGAAGCCAGTAAGTTTCTGCCCAAGGACAATCATTTGATTATTGACATAGGGCCCTACTTATTGTCTCCGCCACTAGGAAACACTCTAGAGGCTGTGGTAAAGACAGAGAGATATGAAATGGAGCACGTTTCTGCCGAGTCAAGAGGCAGGAAGAATCATGAACGAGAGGATGAGATAGATATAGAGGACAGGAGAAGCAGGAAGCAACCAGCAGTTTACATAGATGAGAGTGAGATATCAGAATTATTTGATAAGGTGCTTATTAGCACAGGCTGGGGAAAAGATCCGCCTCCCATGTGTATTTGCCATGAAAATTGTAATCATGGAGCACACAAGAGCCTGCAGAAAAAGGAAGAGCCAGCAAACAAGTCTAGCGATGGAAAGAGCCGTGTAAGAAGACAGAGTTATAATAACCAAAATGAAGTGGTGGATCTAAGTACATTGCTTATTCGATGTGCACAAGCTGTATCATCTGATGATCGTGGGACTGCTGATAAGTTATTAAAGCAGATTCGGCAGCATTCTTCCTCGACAGGCAGCGGATCTCAGAGGCTGGCCCACTGCTTTGCAAATGCTCTTGAAGCACGCTTGGGCGGCACTGGCTCTCAGATCTACACTGCTTTATCCTCCAAAAGAACTTCTGCTGCTGACATGATCAAGGCATACCAAATGTATATTACAGCTTGTCCATACCAAAAGGTTGCCGTTATTTTTGCAAACCATACAATTTTGCATCTCGCCAGTGAGGCAGAAACACTCCACATTGTACATTTTGGCATTCGATATGGCTTCCAATGGCCTTCCTTTATCCTTCGCCTCTCCAAGCGAGCCGGTGGACCCCCCAAGTTGCGCATTACAGGGATTGATCTCCCACAACCTGGTTTGAGGCCGGCAGAGAGAGTCCAAGAGACAGGGAGGCGCCTCGCCAAGTATTGTGAGCGCTACAACGTTCCATTTGAGTATAATGCCATCGCACAAAAATGGGAGACCATCAAGCTTGAAGACCTGAAGATAAAGAAAGGTGAACTCGTGGTTGTGAATTGTCAGAGGCGATTTAAGAATCTTCTTGATGAGACAGTTATGGTGAATAGCCCCAGAGACAGTGTTTTAAAGTTAATCAGGGAGGCAAACCCCAGTATGTTTTTGCAGACTATAGTGAACGGGTGCTATGATGCACCATTCTTTGTGACACGTTTCCGGGAGGCTCTTTTCCATTACTCTTCCATGTTCGATATGCTTGACACCACTGCTGGTCGTGATGATCCAATGAGGTTGATGTTTGAAAAGGAGTTCCTTGGACAGGAGGTAACAAATATTATAGCTTGTGAGGGGTCAGTGAGGACAGAGAGGCCTGAGACGTACAAGCAATGGCAGGTGCGGAACATGAGGGCAGGGTTGAGGCAGGTGCCCTTGGATGGGCATCTGGTGAGTAAATTAAGAGGCAAATTGAGAGAAGCGTTCCACAGTGACTTCATGCTTGATGAAGACGCCAATTGGATGCTGCAAGGTTGGAAGGGCCGAATTATCTATGCTTCCTCCTGTTGGGTGCCTGCGTAG 2304 0.4627 MDPNRISSFIHGYQSSQMPCPLNYDQYTDPLNGIQIRDPFMNFGSVDTNFAGNTASLVLPSVSANVGSPLDETEFSGNMLGYINQVLMEEDMGEQPSMFHDSLALQAAEESLYEVIGEKYPSDSSIQPHFPDYHRVETSEESVSGNISDRSSSGSYVANGTNSVESQWSDLDFKDYKPSLLQATFPADFVFQSPSISTAQLSTNHISKSRNTRHNYNGFVGNYNTGTGFSDSTLLGKNESVFQFKRGVEEASKFLPKDNHLIIDIGPYLLSPPLGNTLEAVVKTERYEMEHVSAESRGRKNHEREDEIDIEDRRSRKQPAVYIDESEISELFDKVLISTGWGKDPPPMCICHENCNHGAHKSLQKKEEPANKSSDGKSRVRRQSYNNQNEVVDLSTLLIRCAQAVSSDDRGTADKLLKQIRQHSSSTGSGSQRLAHCFANALEARLGGTGSQIYTALSSKRTSAADMIKAYQMYITACPYQKVAVIFANHTILHLASEAETLHIVHFGIRYGFQWPSFILRLSKRAGGPPKLRITGIDLPQPGLRPAERVQETGRRLAKYCERYNVPFEYNAIAQKWETIKLEDLKIKKGELVVVNCQRRFKNLLDETVMVNSPRDSVLKLIREANPSMFLQTIVNGCYDAPFFVTRFREALFHYSSMFDMLDTTAGRDDPMRLMFEKEFLGQEVTNIIACEGSVRTERPETYKQWQVRNMRAGLRQVPLDGHLVSKLRGKLREAFHSDFMLDEDANWMLQGWKGRIIYASSCWVPA 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3880 767 MobiDBLite consensus disorder prediction 361 386 - -
Acco01g3880 767 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 346 758 IPR005202 -
Acco01g3880 767 MobiDBLite consensus disorder prediction 292 316 - -
Acco01g3880 767 MobiDBLite consensus disorder prediction 139 158 - -
Acco01g3880 767 ProSiteProfiles GRAS family profile. 385 765 IPR005202 -
Acco01g3880 767 MobiDBLite consensus disorder prediction 140 158 - -
Acco01g3880 767 Pfam GRAS domain family 395 764 IPR005202 -
Acco01g3880 767 MobiDBLite consensus disorder prediction 361 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3880 Acco-ChrAcco01 54378040 54380343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3880 79 767 GRAS Transcription Factor Family AT1G07530 52.684 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco01g3880 GRAS 8.6e-108 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3880 01 54378040 54380343 Acco08g0159 08 1033987 1036311 CCT
Acco08g0158 08 1025431 1028060 Acco01g3880 01 54378040 54380343 CCT
Acco01g3880 01 54378040 54380343 Acco01g3880 01 54378040 54380343 ECH