Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3874 ATGAAATGCTTTCATTTCTCAAACGGTGCTGGAGATCCCCGAGAAGACGATGACTCCGTTACCTCCAAGGTTTCCAGGCTGTCTTGGGCTCGCTCACTAAGCGTCGCTTCTTCTACCTTGGGCTCAAGGAGGAGTGAATTTGATTCTGATTCAAAGGACTTCTCCGATTCAGTCGAGTTCCATAAATTCTTGTCTCAGAGGCGAGCTAATGATTTGCGCGTGTTTTCCTTCTCTGAGCTTAAATTGGCAACTCGTGGGTTTAGCAGAACCCTATTGATTGGAGAGGGAGGGTTTGGTTGTGTCTACAAAGGGGTTGTCAGGGTACCCAACGAGCATGCAAATGACGGTTCTCTTTCCGATATGGATGTTGCGATCAAGCAATTGAATCGCAATGGACCCCAGGGGCACAAAGAATGGATCAATGAAGTAAACTTGCTGGGTGTAATCAAGCATCCAAATCTCGTGAAGTTAGTGGGATATTGCGCTGAAGATGATGAAAGGGGAATTCAGCGGCTTTTAGTCTATGAGCTTATGAGGAATAAGAGCTTGGAAGATCATCTTTTGGGTCGAGTGCCATCAACACTCACATGGGTACCAAGGTTAAAAATTGCTCAAGATGCTGCCCGTGGATTGGCATATCTGCATGAACAAATGGATTTTCAGCTTATTTTTCGGGATTTCAAGACATCCAATGTCCTGCTGGATGAGGACTTCAATGCAAAGCTTTCTGATTTCGGACTTGCCAGGCAAGGACCCTCAGAAGGATTTGGCCATGTTTCTACATCTGTTGTGGGAACTATTGGTTATGCCGCACCGGAGTATGTTCATACTGGTAAGCTAACCGCTAAGAGTGATGTTTGGAGCTTTGGTGTAGTTCTTTACGAACTCATTACTGGGAGGCGAGCTGTTGAGAGAAACCTGCCGAGAAATGAACAAAAGCTTTTGGAATGGGCAAGACATTATGTTTCTGACCCAAGAAAGTTCCATCTTCTGGTAGACCCACGGCTTGAAGGAGAATATTGCATTAAATCAGCTCAAAAACTTGCAACTCTAGCGAACAAGTGTCTTATGAAGCACCCGAAGTGCCGTCCTAAAATGAGTGAAGTGGTTGAGATACTGGGAAGCATAATTAACGAGACAATTTCTGAGTTTCAATGCAGCCTTGAAGCTGCTGTAAGTGAAGAAGAAGAAAAAGAAGAGAAGCTGTCAGAAGAGGACACTGAATCTGGGACGGCTAAACAAGGGAATAATTATCTGAAGAAGGTCTTGGACTTCAGAGAAATGATGAGTTTAAGAAATAAGTCCATTAGAAGGTTGGATTGGAAAAATTGGGCGCCTGGTTTGGTACGAACTTGGTGA 1359 0.4437 MKCFHFSNGAGDPREDDDSVTSKVSRLSWARSLSVASSTLGSRRSEFDSDSKDFSDSVEFHKFLSQRRANDLRVFSFSELKLATRGFSRTLLIGEGGFGCVYKGVVRVPNEHANDGSLSDMDVAIKQLNRNGPQGHKEWINEVNLLGVIKHPNLVKLVGYCAEDDERGIQRLLVYELMRNKSLEDHLLGRVPSTLTWVPRLKIAQDAARGLAYLHEQMDFQLIFRDFKTSNVLLDEDFNAKLSDFGLARQGPSEGFGHVSTSVVGTIGYAAPEYVHTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWARHYVSDPRKFHLLVDPRLEGEYCIKSAQKLATLANKCLMKHPKCRPKMSEVVEILGSIINETISEFQCSLEAAVSEEEEKEEKLSEEDTESGTAKQGNNYLKKVLDFREMMSLRNKSIRRLDWKNWAPGLVRTW 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3874 452 Gene3D Transferase(Phosphotransferase) domain 1 178 399 - -
Acco01g3874 452 FunFam Serine/threonine-protein kinase BIK1 55 177 - -
Acco01g3874 452 PANTHER OS01G0588500 PROTEIN-RELATED 51 375 - -
Acco01g3874 452 ProSiteProfiles Protein kinase domain profile. 87 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3874 452 ProSitePatterns Protein kinases ATP-binding region signature. 93 126 IPR017441 GO:0005524
Acco01g3874 452 SUPERFAMILY Protein kinase-like (PK-like) 69 373 IPR011009 -
Acco01g3874 452 CDD STKc_IRAK 93 376 - -
Acco01g3874 452 Gene3D Phosphorylase Kinase; domain 1 67 177 - -
Acco01g3874 452 Pfam Protein tyrosine and serine/threonine kinase 92 373 IPR001245 GO:0004672|GO:0006468
Acco01g3874 452 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 178 387 - -
Acco01g3874 452 Coils Coil 388 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3874 Acco-ChrAcco01 54344593 54346949 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3874 3 413 Glycoside Hydrolase AT3G07070 41.627 2.39e-96 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco01g3874 PK_Tyr_Ser-Thr 4.6e-46 CL0016