Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3872 ATGGGTATTTGCTTGAGCGCCCAAATTAAAGCAGAGAGCCCATGGAACACAGGGCTGAATTCAAAATATGTGAGCAGTGACGGAAAGGATTCGATCAGCACAGGAAGCAAGGCGTCGGCGGTGTCAGTTCCTCAGACTCCAAGGAGTGTGGGAGAGATCTTGCAGTTATCCACTTTAAAGAGTTTCACTTTAGCAGAATTGAAGGCTGCCACCAGAAATTTCCGTCCAGACAGTGTGTTGGGAGAAGGTGGTTTCGGATCAGTGTATAAGGGGTGGATTGATGAGCACTCTCTGATTGCTGCCAAACCAGGGACTGGCATGGTTATTGCTGTCAAAAGACTCAATCAAGATGGTTTGCAAGGTCACAAGGAGTGGTTGACCGAAGTGAACTACCTGGGACAGCTTTCTCATCCACATCTCGTGAAATTAATTGGTTATTGCCTGGAAGATGAACATCGTCTTTTGGTGTACGAATTCATGCCTCGAGGAAGCTTGGAGAATCATCTGTTCAGAAGAGGTTCGTATTTTCAACCTCTCTCCTGGAGCCTCCGGATGAAGGTTACTCTTGGCGCCGCCAAAGGACTTGCATTTCTTCACAGCGGCAACATCAAAGTCATATACCGTGATTTCAAAACTTCAAATGTCTTGCTAGATTCTAAATATAATGCAAAACTTTCTGATTTCGGGCTGGCAAAAGACGGACCAACGGGCGACAAGAGTCACGTCTCCACCAGAGTCATGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCCACAGGTCACCTGACGGCCAAGAGCGATGTGTATAGTTTTGGAGTTGTGCTACTGGAAATGTTATCGGGGCGACGAGCTGTTGATAAGAATAGGCCGTGTGGACAGCACAATTTGGTGGAATGGGCAAAGCCCTGTTTGGCTAGCAAGCGAAAGATCTTTCGCATTATGGACAATCGTCTGGAAGGTCAGTATTCGATCGACGAGGCGCATAAGACGGCGATGCTGGCTCTGCGATGCCTCTCCGGCGAGCCCAAAATAAGGCCCAACATGGATGATGTTGTCAAAGCTCTGGAGCAGCTCCAAGTCTCGGTTGATGAAAATGGTGGAAGCCATCACAACTCTCGGCATCGTTCTCGGAGAAGAAGCGCCGATGACTTTACCGACCGGAGGGCTTATCCCAGGCCCTCTGATTCTGCTCTCTATGCTTGA 1206 0.4851 MGICLSAQIKAESPWNTGLNSKYVSSDGKDSISTGSKASAVSVPQTPRSVGEILQLSTLKSFTLAELKAATRNFRPDSVLGEGGFGSVYKGWIDEHSLIAAKPGTGMVIAVKRLNQDGLQGHKEWLTEVNYLGQLSHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRMKVTLGAAKGLAFLHSGNIKVIYRDFKTSNVLLDSKYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPCGQHNLVEWAKPCLASKRKIFRIMDNRLEGQYSIDEAHKTAMLALRCLSGEPKIRPNMDDVVKALEQLQVSVDENGGSHHNSRHRSRRRSADDFTDRRAYPRPSDSALYA 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3872 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Acco01g3872 401 Pfam Protein tyrosine and serine/threonine kinase 78 356 IPR001245 GO:0004672|GO:0006468
Acco01g3872 401 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g3872 401 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Acco01g3872 401 Gene3D Phosphorylase Kinase; domain 1 51 159 - -
Acco01g3872 401 PANTHER OS01G0588500 PROTEIN-RELATED 40 360 - -
Acco01g3872 401 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Acco01g3872 401 FunFam Probable serine/threonine-protein kinase PBL8 160 376 - -
Acco01g3872 401 MobiDBLite consensus disorder prediction 363 401 - -
Acco01g3872 401 CDD STKc_IRAK 80 359 - -
Acco01g3872 401 SUPERFAMILY Protein kinase-like (PK-like) 46 356 IPR011009 -
Acco01g3872 401 Gene3D Transferase(Phosphotransferase) domain 1 160 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3872 Acco-ChrAcco01 54340540 54342611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3872 44 364 Glycoside Hydrolase AT3G07070 49.096 3.06e-108 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco01g3872 PK_Tyr_Ser-Thr 2.6e-45 CL0016