Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3861 ATGACTCTGAACAAATTCTCGATCGGAATTCTCGAAGTGCTTCTGTTATCTGCAGGGATTGAACTGGGCATGGCTTCCGTGGATATGAACACGAAGCAAGAGTCGTTTGTGATGTTGGTTTGTGCTGCGGTTTCTGTCACAGGCTCTAGTGCCGCTTTAAGTCCAAAACTTCCGGGGAAGAATGAAGCAGCTCATTTGCCTAAGACACTATTCAGCGCTGGAACCACGGCGAACCTAGTGGAGGAGATCATCAACCTTGGAGATCACATACTCAGCAGCTTTGGAGAGACAAGAAGGGGAGGAACCACGACGGAGACGATTGGAGCAAGCCTCCTCCTTCAAAAGCAACTCAAAGATCTTTGCAAGAACCCGGTCGATGGGTTTTCCGCCGGGTTGGTGGATGAAAACATTTTTGAATGGAATGTGACGATAATTGGACCTCCGGATACTCTCTACGAGGGAGGGTTTTTCAATGCTATTATGAGTTTTCCATCCAATTACCCAAATAGTCCACCAACAGTGAAATTCACCTCGGAAATCTGGCATCCTAATGTATATCCTGATGGTCGGGTTTGCATATCAATTCTTCATCCTCCAGGCGAGGATCCAAATGGTTATGAGCTTGCAAGTGAGCGCTGGATGCCTGTTCATACAGTAGAGAGTATAGTATTGAGTATAATATCAATGCTTTCTAGTCCTAATGATGAGTCTCCTGCAAATGTCGAAGCTGCGAAGGAGTGGAGAGATAAGAGGGATGATTTCAAGAAAAAGGTGAGCCGCTGCGTGAGAAAGTCACAAGAAATGTTGTGA 810 0.4593 MTLNKFSIGILEVLLLSAGIELGMASVDMNTKQESFVMLVCAAVSVTGSSAALSPKLPGKNEAAHLPKTLFSAGTTANLVEEIINLGDHILSSFGETRRGGTTTETIGASLLLQKQLKDLCKNPVDGFSAGLVDENIFEWNVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWMPVHTVESIVLSIISMLSSPNDESPANVEAAKEWRDKRDDFKKKVSRCVRKSQEML 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3861 269 SUPERFAMILY UBC-like 109 265 IPR016135 -
Acco01g3861 269 FunFam ubiquitin-conjugating enzyme E2 7 106 269 - -
Acco01g3861 269 SMART ubc_7 111 267 - -
Acco01g3861 269 Gene3D Ubiquitin Conjugating Enzyme 108 269 IPR016135 -
Acco01g3861 269 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 181 196 IPR023313 -
Acco01g3861 269 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 108 267 IPR000608 -
Acco01g3861 269 Pfam Ubiquitin-conjugating enzyme 113 261 IPR000608 -
Acco01g3861 269 CDD UBCc 121 262 IPR000608 -
Acco01g3861 269 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 109 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3861 Acco-ChrAcco01 54289356 54293899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3861 3 53 Inorganic Solute Cotransporters AT1G80310 76.471 2.73e-16 76.3