Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g3838 ATGAATCACACCGTCGCCAGATTCTCATGCTCTGCCGAATTCCTCGGGAATATGCCGTCGCCGGACGTCATGTCAGCTCCGGCAAAAAGTTTTCAGTGCCAACTGGAGTGGGAGGTGAGCCACAGCAGTTGCAGCAGTGGGTGCAGCGGCCATGGATCGCCCACTTCTCTGACGAGTTACCAAGGCGTAATGTCTGAGAGAAGCATAAACAGCCATTCTCTGCAGGGGAGCGGGGCCCACCAACCCGCTTCTGCTCCGTTCTTCGCCGACTTGCTGGAGGAGTCGCCGGTGAGAAAAGTTTGCAGTTCCGGTGATTTGCAGAGGATGAATGTGATGCAAAACAATGGGCGGTCAGAAAGTGGAGTGTGGAGCGAAAGCAGTATGATCATCGAAGGAATAATGAGCAGAGCGCATCCTTATAGCCCGGAGGAGAAGAAAGTGAGGATTGAGAGATACAGAGTCAAGAGACATAAGAGGAACTTCCACAAGACAATTAAGTATGTATGCAGGAAGACATTGGCGGACAGCAGGCCACGCATCAGAGGAAGATTTGCAAAGAGTGAAGAAAGTGATCAGAAGAAAATTGATGATATGATTGAGGAAGAAGATTATGAGAATTGGGACAGTTTTTTTGAAACACTGGTGGTCGCAAATCATGTGCACCAGCCATGA 672 0.497 MNHTVARFSCSAEFLGNMPSPDVMSAPAKSFQCQLEWEVSHSSCSSGCSGHGSPTSLTSYQGVMSERSINSHSLQGSGAHQPASAPFFADLLEESPVRKVCSSGDLQRMNVMQNNGRSESGVWSESSMIIEGIMSRAHPYSPEEKKVRIERYRVKRHKRNFHKTIKYVCRKTLADSRPRIRGRFAKSEESDQKKIDDMIEEEDYENWDSFFETLVVANHVHQP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g3838 223 ProSiteProfiles CCT domain profile. 145 187 IPR010402 GO:0005515
Acco01g3838 223 Pfam CCT motif 147 187 IPR010402 GO:0005515
Acco01g3838 223 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 36 201 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g3838 Acco-ChrAcco01 54104334 54105295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g3838 127 195 C2C2-CO-like Transcription Factor Family AT5G57660 44.928 2.45e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco01g3838 CCT 7.3e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3838 01 54104334 54105295 Acco01g3838 01 54104334 54105295 ECH